Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq5467 131 1e-25
seq1267 105 6e-18
seq1156 100 3e-16
seq629 82.4 7e-11
>seq5467
Length=66102
Score = 131 bits (144), Expect = 1e-25
Identities = 176/244 (72%), Gaps = 1/244 (0%)
Strand=Plus/Minus
Query 25159 TTTTCAATTAAA-CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGA 25217
|||| |||| | || |||||| | ||||| ||||| |||| || ||| | || ||
Sbjct 30064 TTTTAGATTAGATCACCATGCAGATCTTTGTGAAAACCCTAACTGGCAAAACCATTACTC 30005
Query 25218 TCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGG 25277
| ||||| ||| | | |||||||| ||| | |||||| ||||||| || ||||| |
Sbjct 30004 TGGAAGTAGAACCTAGTGATACTATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAAG 29945
Query 25278 GTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA 25337
|||| || || || |||||||||||||||| | || |||||||| || |||| | |
Sbjct 29944 GTATTCCACCAGACCAGCAAAGACTCATTTTTGCAGGTAAACAACTGGAGGATGGACGGA 29885
Query 25338 ATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAG 25397
| || |||||||| ||||| ||||| || ||||| | || | |||||||||
Sbjct 29884 CCCTTTCTGACTACAATATCCAAAAGGAATCAACTCTTCATCTGGTTCTGCGATTGAGAG 29825
Query 25398 GAGG 25401
||||
Sbjct 29824 GAGG 29821
>seq1267
Length=316221
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || || | || || ||| | ||||| | ||||| ||| | |
Sbjct 206202 CATGCAGATCTTTGTTAAGACTCTGACAGGTAAAACTATCACCCTGGAAGTTGAACCAAG 206143
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| ||||| || | ||||| ||||| ||||||||||| || || || || ||
Sbjct 206142 TGACACTATTGAAAACGTAAAGGCTAAAATCCAGGATAAAGAGGGGATCCCTCCAGACCA 206083
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||||| | |||| | || || || | ||||||| |||| | | ||||||||
Sbjct 206082 GCAAAGGTTGATTTTTGCAGGAAAGCAGTTGGAAGATGGAAGAACTTTATCTGATTACAA 206023
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||||| || || |||| |||||| | || | ||||||||
Sbjct 206022 TATTCAAAAAGAGTCAACACTTCACTTAGTGCTGAGGCTCAGAGGAGG 205975
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
||||||| | ||||| || || | || || ||| | ||||| | ||||| ||| | |
Sbjct 205974 CATGCAAATCTTTGTTAAGACTCTGACAGGTAAAACCATCACCCTGGAAGTTGAACCAAG 205915
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| ||||| || | || || |||||| ||||||||||| || || || || ||
Sbjct 205914 TGACACTATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAGGGGATCCCTCCAGACCA 205855
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTAC 25351
||| || | |||| | ||||| ||||| || |||| |||| ||||| |||||
Sbjct 205854 GCAGAGGTTAATTTTTGCTGGCAAGCAACTGGAGGATGGAAGAACCTTGTCA--GATTAT 205797
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| || || || || || ||| | || ||||| || |||||| | || ||
Sbjct 205796 AACATACAGAAGGAGTCGACCCTCCACTTAGTATTGAGATTGCGTGGTGG 205747
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| ||||| | ||||| ||| | || || | ||||| ||| |||
Sbjct 206430 CATGCAGATCTTTGTGAAAACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAACCCAG 206371
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || || || || || ||||| || || || || || ||
Sbjct 206370 TGACACAATTGAAAATGTGAAGGCTAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCA 206311
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| || | |||| | || || || | ||||||| |||| | | ||||||||
Sbjct 206310 GCAGAGGTTGATTTTTGCAGGAAAGCAGTTGGAAGATGGAAGAACTTTATCTGATTACAA 206251
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||||||||||| || || |||| |||||| | || | ||||||||
Sbjct 206250 TATTCAAAAAGAGTCAACACTTCACTTAGTGCTGAGGCTCAGAGGAGG 206203
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||||||||| |||| |||||| | ||||| | ||||| || | |
Sbjct 206657 ATGCAGATCTTTGTAAAAACGCTAACAGGAAAAACTATCACTCTGGAAGTGGAGCCTAGT 206598
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || || || | || || |||||| || ||||| || || || || || ||
Sbjct 206597 GACACCATTGAAAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGACCAA 206538
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | |||| | || ||||| | || |||| | | | |||||| | || |
Sbjct 206537 CAGAGATTAATTTTTGCTGGAAAACAGTTGGAGGATGGTCGCACATTGTCAG--ACTATA 206480
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
| |||||||||||||| || ||||| ||||||| |||
Sbjct 206479 ACATTCAAAAAGAATCTACTCTTCATCTAGTGTTGAGA 206442
>seq1156
Length=327524
Score = 100 bits (110), Expect = 3e-16
Identities = 178/256 (70%), Gaps = 9/256 (4%)
Strand=Plus/Plus
Query 25125 TTTAAGTCTTTGAACACTAAAATTATATAAGTAGTTTTCAATTAAACAACATGCAAGTGT 25184
||| || |||| || ||| |||| ||| | ||||| || ||| ||||| | |
Sbjct 17447 TTTGAGGCTTTTAAATCTATAATTTTATTTTTC--TTTCAGTT---CAAAATGCAGATCT 17501
Query 25185 TTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCG 25244
|||||||||| || || ||||| | || || | ||||| || | | || ||||| |
Sbjct 17502 TTGTAAAAACCTTGACAGGAAAGACTATTACCTTAGAAGTAGAGCCTAGTGACACTATTG 17561
Query 25245 AGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCA 25304
|| | ||||| |||||| |||||||| || || || || ||||| || ||| | |
Sbjct 17562 AGAATGTAAAGGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGATCAACAGAGATTAA 17621
Query 25305 TTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTACAATATTCAAAA 25362
| | | || || || || ||||||| ||| | | ||| |||||||||||||| ||
Sbjct 17622 TATTTGCAGGAAAGCAGCTAGAAGATGGAAGAACACTATCA--GATTACAATATTCAGAA 17679
Query 25363 AGAATCCACCATTCAT 25378
||| ||||| |||||
Sbjct 17680 AGAGTCCACTCTTCAT 17695
>seq629
Length=499154
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
|| ||||||| | ||||| || || | || |||||| | ||||| | ||||| || ||
Sbjct 5734 CACCATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACCATCACTTTGGAAGTGGA-GC 5792
Query 25231 CAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289
||| || || || ||| | |||||| ||| || || || || || || || || |
Sbjct 5793 CAAGTGACACAATAGAGAATGTAAAAGCAAAGATCCAAGACAAGGAAGGCATCCCACCTG 5852
Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349
| || || ||||| || | | || |||||||| || |||| | ||| | || |
Sbjct 5853 ACCAACAGAGACTGATCTTTGCTGGTAAACAACTGGAGGATGGTCGAACACTTTCTGACT 5912
Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||| || ||||||||||| ||| | ||| | || || |||| |||||
Sbjct 5913 ACAACATCCAAAAAGAATCTACCCTACATCTGGTTCCGAGGCTGAGGGGAGG 5964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443498775521760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |