Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4435 118 1e-21
seq1267 114 1e-20
seq629 109 5e-19
seq5467 107 2e-18
>seq4435
Length=89394
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||| |||| |||||| ||| |||||| ||||| |||||||| | |
Sbjct 36043 CCACCACGAAGTCTCAGAACCAGATGTAAAGTAGACTCCTTCTGAATATTGTAATCTGAC 35984
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || | || |||| |||||| || ||||| || || | || || || | |||
Sbjct 35983 AAGGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 35924
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688
| | |||||| || ||| ||| |||| ||| | | |||||||| | || ||
Sbjct 35923 ATTCCCTCCTTATCTTGGAT-TTTAGCTTTGACGTTCTCTATGGTGTCGCTAGGCTCTAC 35865
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
||||| ||||| || || || || | || || |||||||||||||||
Sbjct 35864 CTCCAAAGTGATTGTCTTGCCTGTTAGCGTCTTTACAAATATCTGCATT 35816
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | |||| ||||| || | || || || |||||||||||||| | |
Sbjct 36727 CCTCCACGCAGTCTCAGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGAC 36668
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || |||| ||||| || ||||| || |||| || ||||| | |||
Sbjct 36667 AGGGTTCTTCCATCTTCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGG 36608
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||| || ||||| |||| | || | | || || || | ||| |||
Sbjct 36607 ATTCCCTCCTTATCTTGAATCTTAGCTTTCACATTTTCGATTGTATCACTGGGTTCTACC 36548
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | ||||| ||||| || |||| ||| || ||||| || |||||||
Sbjct 36547 TCAAGGGTGATGGTTTTTCCTGTCAGAGTCTTAACAAAAATTTGCATTC 36499
>seq1267
Length=316221
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580
||||| ||| || || | || ||| |||||||| |||||||| | || |||| |
Sbjct 206214 CCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCC 206273
Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640
|| |||| |||||| || ||||| ||||||| ||||||||| | ||| | | || ||
Sbjct 206274 ATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCCTTCTTT 206333
Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
||| |||||| ||||| | || | | ||||| || | ||| || || | || ||
Sbjct 206334 GTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCTAGGGTAAT 206393
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || | ||||||||||| ||||||||
Sbjct 206394 GGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | |||||||| | ||| | ||| || ||||||||||| || || | |
Sbjct 206431 CCCCCACGGAGTCTCAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGAC 206490
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || |||| ||| || || ||||| || || | ||| ||||| | |||
Sbjct 206491 AATGTGCGACCATCCTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGA 206550
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | || |||| | ||| ||| | ||| | | || | | ||||| || | |||||
Sbjct 206551 ATTCCTTCTTTGT-CTTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCAC 206609
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739
|||| ||||| ||||| || || | ||||| ||||| |||||||| ||
Sbjct 206610 TTCCAGAGTGATAGTTTTTCCTGTTAGCGTTTTTACAAAGATCTGCATCCT 206660
>seq629
Length=499154
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||||||||| | || || || | ||| || ||| ||||||||||||||||||||| |
Sbjct 6193 TCCACCACGCAGTCTTAAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGA 6134
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || || | || || || || ||||| ||||| |||| | ||| ||||| | ||
Sbjct 6133 GAGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGG 6074
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| || |||||||| ||||||| || | | | | | ||||| || | |||||
Sbjct 6073 GATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCAC 6014
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| ||||| || || | || |||||||| || |||||
Sbjct 6013 TTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966
>seq5467
Length=66102
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | || | || | ||| || ||| || || ||||| || ||||| |
Sbjct 29591 TTCCACCACGCAGTCTTAGGACAAGATGCAAAGTAGATTCTTTCTGAATATTATAATCAG 29650
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| ||| || | || |||||||| ||||| ||||| |||| | ||| ||||| | |
Sbjct 29651 AAAGGGTCCGTCCATCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTG 29710
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| || || ||||| ||||||| || | | | | | ||||| || | |||||
Sbjct 29711 GAATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTCTCAATTGTGTCACTTGGTTCCA 29770
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| ||||| ||||| || || | || || ||||| ||||||||
Sbjct 29771 CCTCCAAAGTGATAGTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449177544388440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |