Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq6937 91.5 3e-13 >seq6937 Length=42376 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/130 (77%), Gaps = 5/130 (4%) Strand=Plus/Minus Query 49293 GTATCTAAACTTATTGGTTCACCTCCTGGATATGTAGGACATGAAACAGGAAATGGTCAG 49352 |||||||| ||||||||||||| || || ||||||||||||||| ||| |||||| Sbjct 6113 GTATCTAAGTTTATTGGTTCACCACCAGGTTATGTAGGACATGAAGAAGG---TGGTCAA 6057 Query 49353 CTTCTTGATAAAGTT-GAACAATTCCCTAATGCAGTACTTCTACTGGATGAAATTGAAAA 49411 | || | |||||| | | || || ||||| || ||||| | ||||||||||| || Sbjct 6056 C-TCACTAAAAAGTTACGAGATTTTCCAAATGCTGTTGTTCTATTAGATGAAATTGACAA 5998 Query 49412 AGCACATCCA 49421 ||| |||||| Sbjct 5997 AGCTCATCCA 5988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1104920157976207