Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq70663 87.8 4e-13 >seq70663 Length=227 Score = 87.8 bits (96), Expect = 4e-13 Identities = 127/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 5637 TGGTCAGAAAAAACAAtttttttGTTGTCTAATTTAGTGGCAAAGGACCCGTACAGGGCG 5696 ||||||||||| ||||| |||| |||| | || |||||||| | |||||| |||||| Sbjct 45 TGGTCAGAAAAGACAATCTTTT--GTGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCG 101 Query 5697 TTAGATAATAATTTGGCAATGCTCCTCATGGTCTGGTTTTTGTTTTTGTCTGCCTGTTCT 5756 || || | || ||||| ||| | || ||| ||||||||| || || | || Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCC 160 Query 5757 TTGGCCTGGATGTTGAGTTGCACATATTCTCTGGCTAAGCACTTCCACTCTGGAAA 5812 |||||| |||||| || ||||| ||||| | || | |||| ||| || ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101445330357460