Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1632 95.1 1e-14 seq6658 82.4 9e-11 >seq1632 Length=265768 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 118753 TGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 118812 ||||||||| ||| || || || ||||| || || ||||| || | ||||| || | Sbjct 23374 TGTACTCTACAATCTCTGTACATAAGTTACTACATTTGATGGTTCCAAGGTTCTGCTGGT 23433 Query 118813 TTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 118864 |||||||| ||||||| ||||| ||||| ||||||||||| ||||| || || Sbjct 23434 TTGACTTTCTGTTACAGGCATCTTTGTAGAGCATGTATGGTGTCCCAGTTTC 23485 >seq6658 Length=47451 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 130073 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 130132 || ||||| | |||| |||||| |||||||| || | ||| || || || |||||| Sbjct 24872 CCAGGCATCATTCCCCTCTTCTTTAACCAGAAGATAGAGGCAAAGGAACCCGAAAAGAAG 24931 Query 130133 ATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA-GGAGCGGGACTTTGTATC 130191 ||||| || ||| ||||| || | || ||||||| ||| || || | | || |||| Sbjct 24932 ATCCCTTCTACAGCAGCGAAGGCTACAAGTCGCTCAGGAAATGGGGCAGCA-TTGTTATC 24990 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 130251 || ||| |||| ||||| | ||||| |||| | ||| || | ||| | || || | Sbjct 24991 AATCCAGTTCAGGGCCCAATCAGCCTTCTTCTTAACACAGGGTAAGGTTTCAATAGCATT 25050 Query 130252 AAAGAGT 130258 |||||| Sbjct 25051 GAAGAGT 25057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616218163921080