Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_028103.1 Length=32939 Score E Sequences producing significant alignments: (Bits) Value seq70663 105 1e-18 >seq70663 Length=227 Score = 105 bits (116), Expect = 1e-18 Identities = 139/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 6096 TGGTCAGAAAAAACAGtttttttATTGTCCAGTTTGGTAGCGAAGGAGCCGTATAGGGCG 6155 ||||||||||| ||| | |||| |||| || ||||| || || | ||||| |||||| Sbjct 45 TGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCG 101 Query 6156 TTGGAAAGCAGTTTTGCAATGGATCTCAGCGTTTGATTTTTGTCTTTGTCGGCTTTTTCT 6215 ||||| |||| || || ||||| | ||| ||||| |||||| | ||||| || Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCC 160 Query 6216 TTGGCGGCGATGTTGAGCTGCACATATTCCCTGGCTACGCATTTCCACTGAGGAAAAACG 6275 ||||| |||||||| |||||||| ||||| | || ||||| ||| | || ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACG 218 Query 6276 GTAGTGCG 6283 || ||||| Sbjct 219 GTGGTGCG 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104924640493266