Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5418 95.1 1e-14 >seq5418 Length=65370 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/179 (73%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 59924 TAAACAA-AAAGCAGAATGGGCCATGCAGTGGATGAG---TCCTGGAGCATCATTTGCAC 59979 |||| || |||||||| ||||| | ||||| || |||| |||| |||||| Sbjct 7968 TAAAGAAGAAAGCAGACTGGGCTCTCACTTGGATTAGCCATCCTACAGCAACATTTGGTG 8027 Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCT 60038 | || | | |||||||| ||| || |||||||| || |||||||| || || | | Sbjct 8028 AGCGAGTTGTGGCTTTTGC-TGCTGTAGAAGGAATATTTTTCTCTGGGTCTTTTGCTTCA 8086 Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 ||||||||||| |||||||||||||| ||||| || || | ||| || |||||||| Sbjct 8087 ATTTTCTGGCTAAAAAAGCGTGGCCTGATGCCTGGTCTCACTTTTAGTAATGAGCTGAT 8145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546558386587920