Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_028113.1 Length=35685 Score E Sequences producing significant alignments: (Bits) Value seq70663 203 7e-48 seq73759 89.7 1e-13 >seq70663 Length=227 Score = 203 bits (224), Expect = 7e-48 Identities = 180/218 (83%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 6006 GATGCCTTTGAGAAGGGCGGGGTCGAGC-TGGTCGGCAAAAACAAtttttttATTGTCCA 6064 |||||||||||| | || | || | | ||||| | ||| ||||| |||| |||| | Sbjct 17 GATGCCTTTGAGG-GTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAA 73 Query 6065 GCTTAGTGGCAAAGGACCCGTAGAGGGCGTTGGAGAGCAGCTTGGCGATGGAACGCAGGG 6124 |||| |||||||| | |||||||||||||||||| |||| |||||||||||| ||||||| Sbjct 74 GCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGG 132 Query 6125 TCTGGTTTTTGTCGCGGTCGGCGCGCTCCTTGGCGGCAATGTTGAGCTGCACGTACTCGC 6184 | ||||||||| |||| ||||||||||||||||| || ||||| ||||||||||| |||| Sbjct 133 TTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGC 191 Query 6185 GCGCCAGGCAGCGCCACTGCGGAAAGACGGTGGTGCGC 6222 |||| | ||| ||||| | |||| |||||||||||| Sbjct 192 GCGCAACGCACCGCCATTCGGGAA--ACGGTGGTGCGC 227 >seq73759 Length=212 Score = 89.7 bits (98), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 6476 GGGCGGCCCAGGCCCGTTCCAAGGGATTCAGCGGAGGGCCCCAGGGCATGGGGTGGGTGA 6535 ||||||| || || || | || || || || || ||||| |||||||||||||||| Sbjct 71 GGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGA 130 Query 6536 GGGCAGAGGCGTACATGCCGCAGATGTCGTAAACGTAGAGGGGCTC-CTCGAGAACTCC 6593 | || ||||||||||||||||| ||||| |||||| ||||||| || ||| | ||| Sbjct 131 GCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCTGGAGTATTCC 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113681914217302