Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq629 129 4e-25
seq1267 118 7e-22
seq1156 116 2e-21
seq5467 107 1e-18
seq4435 104 1e-17
>seq629
Length=499154
Score = 129 bits (142), Expect = 4e-25
Identities = 146/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
||||||||||||||| |||||||| ||||| || | || || ||||||||||| |||||
Sbjct 6157 CTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAA 6098
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|| | | ||||||||| || || | || ||||||||| ||||||| |||||
Sbjct 6097 GATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATT 6038
Query 34635 TAAAATTGTGT--CTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692
||||||| ||| | ||||||||||| || || ||||| || || | || |||
Sbjct 6037 CTCTATTGTGTCACTTGG--CTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTC 5980
Query 34693 ACAAAAATCTGCAT 34706
|||||||| |||||
Sbjct 5979 ACAAAAATTTGCAT 5966
Score = 122 bits (134), Expect = 5e-23
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| ||| || || || ||||| ||||| || || ||||||||||| | || ||
Sbjct 5946 ACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCC 5887
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||||||||| ||||| || | | ||||||||| || || | || ||||||||| |
Sbjct 5886 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 5827
Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGT--CTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||||| ||||| ||||||| ||| | ||||||||||| || || ||||
Sbjct 5826 ATCTTTGCTTTTACATTCTCTATTGTGTCACTTGG--CTCCACTTCCAAAGTGATGGTTT 5769
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
| || || | || ||||||||||| |||||| ||
Sbjct 5768 TTCCAGTGAGGGTCTTCACAAAAATTTGCATGGTG 5734
>seq1267
Length=316221
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|||||| | ||| ||||| || |||||||||||||| ||||| | ||| || | ||
Sbjct 206445 CAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATC 206504
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|| | ||||| || ||||| ||||| | ||||||||| || || | ||| || |||||
Sbjct 206505 CTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTC 206564
Query 34614 TGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| ||| ||| | || || | ||| ||||| ||||||||||| || || |
Sbjct 206565 T-TGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATAG 206623
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || |||| |||||| ||||| ||||||||
Sbjct 206624 TTTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || | || ||| || || || || ||| |||||||| || ||||| ||
Sbjct 206202 GCCTCCTCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGA 206261
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| |||| | ||||| | || || || ||||| || || | ||| ||||| || ||
Sbjct 206262 TAAAGTTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGG 206321
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || |||||| |||||| || | | ||||||||| | || ||
Sbjct 206322 GATTCCTTCTTTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAAC 206381
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| | ||| || ||||| ||||| | ||||||||||| |||||||||
Sbjct 206382 TTCTAGGGTAATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCATG 206430
Score = 91.5 bits (100), Expect = 9e-14
Identities = 153/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
||| || || ||||| || |||||| || |||||||||||||| | |||| | ||
Sbjct 205761 CAATACTAAGTGGAGGGTCGACTCCTTCTGTATGTTATAATCTGACAAGGTTCTTCCATC 205820
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|| ||||| || || ||||| ||||| | ||| ||||| || || | ||||| || ||
Sbjct 205821 CTCCAGTTGCTTGCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCCTCTTTATC 205880
Query 34614 TGTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATC 34671
||| ||| | || || | ||| ||||| | | | || ||||||| ||| ||
Sbjct 205881 -CTGAATTTTAGCCTTCACATTTTCAATAGTGTCACTTGGT-TCAACTTCCAGGGTGATG 205938
Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||||||| || | || || ||||| || ||||||
Sbjct 205939 GTTTTACCTGTCAGAGTCTTAACAAAGATTTGCATG 205974
>seq1156
Length=327524
Score = 116 bits (128), Expect = 2e-21
Identities = 163/226 (72%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| |||||| ||| || ||||| || |||||||| |||||||
Sbjct 17709 AGACGTAGAACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGATAGTGTTCTT 17650
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || || || ||||||||||| | |||||| || || || | ||| ||
Sbjct 17649 CCATCTTCTAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGGAATTCCTTCT 17590
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT---AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665
|| ||| ||| ||||| || || | || | ||| || ||||| ||||| | |
Sbjct 17589 TTATCTTGGAT-TTTTGCCTTTACATTCTCAATAGTGTCACTAGGCTCT--ACTTCTAAG 17533
Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| || || || || || || ||||| ||||| |||||||| ||||
Sbjct 17532 GTAATAGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCATTTTGA 17487
>seq5467
Length=66102
Score = 107 bits (118), Expect = 1e-18
Identities = 168/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||| |||| ||| ||||| |||||||| || || || || |||
Sbjct 29821 CCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAA 29880
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || ||||||||||| ||||| || | | || ||||| || ||
Sbjct 29881 AGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGA 29940
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657
| || || |||||| ||| ||||| ||| || | ||| || || | | | || |
Sbjct 29941 ATACCTTCTTTGTCT-TGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGT-TCTA 29998
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712
|||||| || || ||||| || |||| ||||||||||| ||||||||| ||||
Sbjct 29999 CTTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATGGTGAT 30053
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||| |||||||| ||||| || || | || || || |||||||| |||||
Sbjct 29629 TCTTTCTGAATATTATAATCAGAAAGGGTCCGTCCATCCTCCAGCTGTTTACCTGCAAAA 29688
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | | ||||||||| || || | || || |||||| ||||||| |||||
Sbjct 29689 ATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTC 29748
Query 34636 AAAATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
||||||||| | | | ||||| |||| || || ||||| || || | || || ||
Sbjct 29749 TCAATTGTGTCACTTGGT-TCCACCTCCAAAGTGATAGTTTTTCCAGTGAGGGTCTTGAC 29807
Query 34695 AAAAATCTGCAT 34706
||||||||||||
Sbjct 29808 AAAAATCTGCAT 29819
>seq4435
Length=89394
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || || || || || || ||| || || ||||||||||||||
Sbjct 36499 CCTCCTCTGAGCCTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTGAC 36440
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | | ||||| | ||||| || ||||| ||||| | ||||||||| || ||
Sbjct 36439 AGAGTTCTCCCATCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTGGA 36380
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||| || || || ||| ||||| ||| || | ||| ||||| | || ||
Sbjct 36379 ATTCCTTCTTTATCCTGGAT-TTTTGCTTTCACATTTTCAATAGTGTCACTGGGTTCAAC 36321
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| | |||||| || || || || | ||||| || || |||||||||
Sbjct 36320 TTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCATG 36272
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576
|||| ||||| ||||||||||| | || ||| | ||||| | |||||| || ||||| |
Sbjct 32844 CCTTCTGAATATTATAATCTGATAAGGTGCGCCCATCTTCTAATTGTTTCCCTGCAAAAA 32785
Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-AT 34635
| || | ||||| || || || | ||| || || || ||| ||||| ||| ||| |
Sbjct 32784 TCAATCTTTGTTGATCTGGTGGAATTCCTTCTTTATCCTGGAT-TTTTGCTTTCACGTTT 32726
Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695
||| || || | || ||||| | |||||| || || || || | ||||| ||
Sbjct 32725 TCAATAGTATCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACG 32666
Query 34696 AAAATCTGCATG 34707
|| |||||||||
Sbjct 32665 AAGATCTGCATG 32654
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| || || ||| |||||| ||||| ||||||||||| | || || | |||||
Sbjct 36253 ACCAAGTGAAGTGTGGACTCCTTCTGAATATTATAATCTGATAAGGTGCGACCATCTTCC 36194
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||||| || ||||| || || | ||||| || || || | ||| || || ||| ||
Sbjct 36193 AACTGTTTCCCTGCAAAAATCAATCTTTGTTGATCTGGTGGAATTCCTTCTTTATCT-TG 36135
Query 34618 ATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| ||| | ||||| | ||| || || | || ||||||| || || |||||
Sbjct 36134 AATTTTGGCTTTTACATTTTCAATAGTATCACTGGGTTCAACTTCCAGAGTAATTGTTTT 36075
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || | ||||| ||||| || |||||
Sbjct 36074 TCCAGTAAGTGTTTTAACAAAGATTTGCAT 36045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313629528874769
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