Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_029902.1 Length=38073 Score E Sequences producing significant alignments: (Bits) Value seq70663 127 5e-25 >seq70663 Length=227 Score = 127 bits (140), Expect = 5e-25 Identities = 169/225 (75%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 6095 CGGTGGCGATGCCTTTGAGGTACTTGTCTTCCATC-TGGTCGGCGAAGACGGTGGTCTTG 6153 |||||| |||||||||||| | | |||||| ||||| | ||||| | | ||| Sbjct 12 CGGTGG--ATGCCTTTGAGGGTGCCG-CATCCATCGTGGTCAGAAAAGACAATCTT-TTG 67 Query 6154 TTGTCCAGCTTGGTGGCGAAGGAGCCGTAGAGGGCATTGGAGAGGAGCTTGGCAATGCTG 6213 | ||| ||||||||||| || | ||||||||||| ||||| || | |||||| ||| | Sbjct 68 T-GTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAG 125 Query 6214 CGGATGGTCTGGTTCTTGTCCCGGTCCGCCTGTTCCTTGGCGCGGATGTTGAGCTGGACA 6273 || | ||| ||||| ||| | || || || | |||||||| |||||| ||||| || Sbjct 126 CGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACG 184 Query 6274 TACTCGCGGGCCACGCAGCGCCACTCGGGGAACACGGTGGTGCGC 6318 || ||||| || ||||| ||||| ||||| | |||||||||||| Sbjct 185 TATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGTGCGC 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121297489473310