Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq70663 154 3e-33 >seq70663 Length=227 Score = 154 bits (170), Expect = 3e-33 Identities = 162/206 (79%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 5823 TGACGGTGTCCTCTTCCAG-GTGGTCAGAAAAGACCGtttttttGTTGTCCAGCTTGGTG 5881 ||| |||| || | |||| ||||||||||||||| | |||| |||| ||||||||| Sbjct 25 TGAGGGTG-CCGCATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTG 81 Query 5882 GCGAACGAGCCGTAGAGGGCGTTGGAGAGCAGCTTTGCGATGCTGCGCATGGTTTGGTTC 5941 || |||| ||||||||||||||||| |||| ||| |||||| ||||| ||||||||| Sbjct 82 GCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT- 139 Query 5942 TTTTCTCGGTCGGCCTTCTCTTTGGCCGCGATGTTGAGTTGCACGTACTCTTTGGCTATG 6001 ||| | || ||||| ||| |||||||||||||| || |||||||| || || | | Sbjct 140 TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACG 199 Query 6002 CACTTCCATTCTGGAAACACGGTGGT 6027 ||| |||||| |||| |||||||| Sbjct 200 CACCGCCATTCGGGAA--ACGGTGGT 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104130554128632