Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq994 185 1e-41
seq6658 149 9e-31
seq3845 140 5e-28
seq1632 132 7e-26
seq5418 131 2e-25
>seq994
Length=361151
Score = 185 bits (204), Expect = 1e-41
Identities = 677/1047 (65%), Gaps = 26/1047 (2%)
Strand=Plus/Minus
Query 169552 CCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTAAAAAATTTCCATCTGGG 169611
|| ||||| || ||| | ||| |||||| | | || || || ||||||||| |||
Sbjct 159150 CCCATGTTAGCTGAACCTTGCAGTTCTGTGGAATATGCCTTCAAGAAATTTCCAAGTGGA 159091
Query 169612 ATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTCATAAAAATAATAACAAC 169671
|||| ||| ||| | || ||||| |||||| | || || || || ||| || ||||
Sbjct 159090 ATGTATGCTGAAATAAAGTATGATGGTGAAAGGGTACAGGTCCACAAACATGGAGACAAA 159031
Query 169672 TTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTTACCACATAAAGTTGATTATCTCAAA 169731
||| | |||||| ||| | | ||||| || | || || ||| || |||| |||
Sbjct 159030 TTTAATTATTTTAGTCGAAGTTTAAAACCCGTGATGCCTCACAAAATTTCACATCTGAAA 158971
Query 169732 GAATACCTTCCTAAAGCATTTAAAAAAGCTACGTCTATTATCTTGGATTCTGAAATTGTT 169791
|||||| | |||||||| ||| |||||| | | || | ||| |||| | |
Sbjct 158970 GAATACATACCTAAAGCTTTTCCTCAAGCTAGTGATTTGATACTTGATAGTGAAGTACTA 158911
Query 169792 CTAGTTGACGAACACAAT---ATACCACTTCCGTTTGGAAGTTTAGGAATACACAAAAAG 169848
|| || ||| || | | | |||||||| ||||||| |||||| | || |||||
Sbjct 158910 CTTGTAGACACTCAAACTGGGAAGCCACTTCCATTTGGAACATTAGGAGTTCATAAAAAA 158851
Query 169849 AAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTGATTGTCTATACTTTGATGGA 169908
| | || | | | | |||||||||| |||||||| || | ||| | |||||
Sbjct 158850 GCTGCTTTCAAGGATGCAAGTGTGTGTTTGTTTGTCTTTGACTGCATTCACTATAATGGA 158791
Query 169909 TTTGATATGACTGATATCCCATTGGTTGATAGAAG----ATCTTTTCTCA-AAGATGTAA 169963
|| | | || || || ||| ||| | || | ||||| || ||| |
Sbjct 158790 GAAAATCTAATGGAGCGTCCTTTATCTGAGAGACGCAACATTCTGTCTCAGAACATG--A 158733
Query 169964 TGACAGAAATACCTAATAGAATAGTATTTTCGGAATTGACAAATATTACTAACGAATCAC 170023
|| || || ||| || | ||||| ||| ||| | | | | || |
Sbjct 158732 TG---GAGATTAAAAATCACATCATGTTTTCAGAAATGAAGCTTGTGATAGAAAAAGAAG 158676
Query 170024 AACTGACAGATGT-ATTAGATGATGCACTAACAAGAAAACTAGAAGGTTTGGTTTTAAAA 170082
||| | | | | ||| || || ||| || ||||||| | ||| | |||
Sbjct 158675 TACTAAAAAAAATGATTCAATCTGCCATTAATCAGGGTT-TAGAAGGGCTAGTTCTGAAA 158617
Query 170083 GATATTAATGGTATATATGAGCCAGGAAAACGTAGATGGCTTAAAATAAAGAGAGACTAC 170142
| | || | ||||||||||||||||| ||||| ||||| || | ||| |||
Sbjct 158616 GGCACAAACAACACGTATGAGCCAGGAAAACGACATTGGCTAAAAATTAAAAAAGATTAC 158557
Query 170143 TTGAATGAGGGTTCGATGGCGGATTCTGCAGATTTAGTAGTATTGGGGGCATATTATGGA 170202
| | || || | ||||| ||||| || ||| | || || | || ||||||| ||||
Sbjct 158556 CTAGAAGATGGAGCAATGGCAGATTCAGCTGATCTTGTTGTTCTTGGAGCATATTTTGGA 158497
Query 170203 AAAGGAACAAAGGGTGGAATGATGGCAGTATTTTTGATGGGTTGCTACGATGACGACTCT 170262
| |||| || |||||||||||| || ||||| ||||||| || |||||| | ||
Sbjct 158496 ACTGGAAATAAAGGTGGAATGATGTCAATATTTCTGATGGGATGTTACGATCCTG---CT 158440
Query 170263 GGT---AAATGGAAGACTGTAACTAAA-TG--TTCTGGACATGATGATAACACTTTAAGG 170316
|| |||||| ||||| || ||| || | |||||||||||| |||||
Sbjct 158439 AGTAAAAAATGGTGTACTGTTACAAAAGTGCATGGAGGACATGATGATGCTACTTTTGAA 158380
Query 170317 GTTTTGCAAGACCAATTAAAGATGATTAAAATAAGTAAGGATCCCaaaaaaaTTCCAGAG 170376
| ||| | | | |||| ||||| || ||||| || | ||| |||| |
Sbjct 158379 AAACTCCAAACTGAGCTGGACATGAAAAAAATTAGGAAGGACCCAAGTAAAGTTCCTGCT 158320
Query 170377 TGGTTAGTAGTTAATAAAATATATATTCCCGATTTTGTAGTAGAGGATCCTACACAATCT 170436
||| | ||| ||||||| ||||| |||||||| | | ||||||| | | ||
Sbjct 158319 TGGCTGAAAGTGAATAAAACTCTCATTCCTGATTTTGTTGCTAATGATCCTAAAAACTCC 158260
Query 170437 CCAATCTGGGAGATTTCAGGAGCTGAGTTCACATCATC-GAAGTCTCATACGGCAAATGG 170495
||| | ||||| ||| ||||| || || ||| | | ||| || ||||| || |||||
Sbjct 158259 CCAGTATGGGAAATTGTTGGAGCAGAATTTACAAAAGCAGAAATC-CATACAGCCAATGG 158201
Query 170496 AATATCTATTAGATTTCCTAGATTCAGTAGGATCAGAGACGATAAGACATGGAAAGAATC 170555
||| |||||| | ||||| ||| | | ||| |||| || || |||||||||||| |
Sbjct 158200 AATCTCTATTCGTTTTCCAAGAGTTGCAAAAATCCGAGATGACAAAACATGGAAAGAAGC 158141
Query 170556 TACCCATCTACACGATTTAGTAAAATT 170582
|| | |||| || ||| | ||||
Sbjct 158140 CACAAACTTACAGGAATTACAAGAATT 158114
>seq6658
Length=47451
Score = 149 bits (164), Expect = 9e-31
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072
||| ||||| ||||||||||||||||||||||||| || ||||| || || || |||||
Sbjct 26427 CAAGTTCTCCATCACTATTCCATCACTAGCAGCAAAGAAGGCCAACACGTGATTTATAAA 26486
Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132
| | |||| || | | | || ||||| || || ||||| || | || |||||
Sbjct 26487 GTGTCTTTCTTCAGGTTTTAACTTGTTCCAATCTGGAATGTCTTTAGACAAGTCCACTTC 26546
Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192
|||||| |||||||| || ||||||||||| || ||||||| ||| ||||| | || |
Sbjct 26547 TTCAGCAGTCCAGAAGGAAGCCTCTGCTTTCTTGTACATATCCCAAATATCTGGGTACTC 26606
Query 47193 GATCGGAAAAATAACAAATCTATTTGGATTTTTTG 47227
|| || ||||| ||||||| ||| |||||||
Sbjct 26607 AATTGGTAAAATTACAAATCGTCCTGGGTTTTTTG 26641
Score = 138 bits (152), Expect = 2e-27
Identities = 165/223 (74%), Gaps = 7/223 (3%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| || || | ||||||| || || | |||||||| | ||| | ||| ||
Sbjct 24836 TCATCTCTGCTTATCAGTTCGTTACTGAAAGTCAAGCCAGGCATCATTCCCCTCTTCTTT 24895
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
| ||| || |||| || || || || |||||||| || ||||||||||| ||||| ||
Sbjct 24896 AACCAGAAGATAGAGGCAAAGGAACCCGAAAAGAAGATCCCTTCTACAGCAGCGAAGGCT 24955
Query 46774 ACAAGTCTCTCTCCGTAACTG-----GCATCATTATGAATCCACCTTTGAGCCCAATCAG 46828
||||| || ||| | || || |||| |||| |||||| | | ||||||||||
Sbjct 24956 ACAAG--TCGCTCAGGAAATGGGGCAGCATTGTTATCAATCCAGTTCAGGGCCCAATCAG 25013
Query 46829 CCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871
|||| ||||| ||||| || | ||||| |||||||| |||||
Sbjct 25014 CCTTCTTCTTAACACAGGGTAAGGTTTCAATAGCATTGAAGAG 25056
>seq3845
Length=110360
Score = 140 bits (154), Expect = 5e-28
Identities = 174/237 (73%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 46642 CAATGAAGGCCT---TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698
||| |||||| | ||||||||||| || | ||| ||| ||||| | ||||||||
Sbjct 72998 CAAAGAAGGCTTACCTCATCTCTACTGATAAGTTCATTACTGAATGTCAAACCAGGCATC 72939
Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758
|| || | ||| || ||||| ||||| | || || || ||||||||||||||||| ||
Sbjct 72938 AGACCTCTCTTCTTAAGCCAGAATATTGATGCAAATGACCCAGAAAAGAATATGCCCTCC 72879
Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTT 46815
||||| || || || |||| || ||| || || | || | |||| ||||| |
Sbjct 72878 ACAGCAGCAAAGGCTACAACTCGCTCACCAAAAGTAGCTGTAGGATGACCTATCCAGTTG 72819
Query 46816 TGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 46872
|||||||||| || || ||||| |||||||||| ||||| || ||||| || |||
Sbjct 72818 AGAGCCCAATCTGCTTTCTTCTTCACACAAGGCAAGGTTTCAATTGCATTGAAAAGA 72762
Score = 125 bits (138), Expect = 1e-23
Identities = 157/214 (73%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 47012 ACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070
|||| ||| ||||| || || ||||||||||||||||| || |||| | || ||||
Sbjct 71040 ACAAGATTTTCATTAACAATCCCATCACTAGCAGCAAAGAAAGCCAGGATGTGAGAAATA 70981
Query 47071 AAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACT 47130
|| | || |||||| | | || | ||| | | | ||||| || | ||| |||
Sbjct 70980 AAGTGTTGTTCATCTTCTTTTAAATTCTCCCACTGTATCAGGTCTTTGGACAGATCAACT 70921
Query 47131 TCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATAT 47190
||||| | ||||||||||| ||||||||||| |||||||| | ||| || || | |||
Sbjct 70920 TCTTCTACAGTCCAGAATGAAGCCTCTGCTTTCTTATACATCTGCCAGATGTCTGGGTAT 70861
Query 47191 TGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224
| || ||||||||||||||||| |||||||
Sbjct 70860 TCAATGGGAAAAATAACAAATCTCCGAGGATTTT 70827
>seq1632
Length=265768
Score = 132 bits (146), Expect = 7e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569
||| ||| |||||||||||||||||||| |||| | || || |||| || |||||
Sbjct 30709 ATACAACTGTTCAAATTCATCTCCCCAACATTCATGAAGTCCTGGGCATTGATGGGGACA 30768
Query 76570 CATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAG 76629
||| || |||||| ||||| | | || || |||||| || || |||||||| |
Sbjct 30769 CATTAAAGACCACATTCCATCATTTTCTACTCGAGACATAAACAGGTCTGGTATCCACAA 30828
Query 76630 AGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAG 76689
|||| ||| | || || | || | |||| || || || ||||| ||||| ||||| ||
Sbjct 30829 AGCATAAAACAAGTCACGAGCTCGATGTTCCTCCTTACCAGTATTTTTTTTCAGATCCAG 30888
Query 76690 GAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745
|| || | |||||| | |||||||||||| | ||| | || | | |||| ||||
Sbjct 30889 AAATTCAAAAATATCTGCATGCCATGGTTCCAAATAGACAGCAAAAGCACCAGGTC 30944
Score = 127 bits (140), Expect = 3e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018
|||||||| || | ||| ||| |||| || ||| || || ||||||| || || |||
Sbjct 21155 TATGTTTCATATGGCCCCAACTTCTCAGATAATTCACAGCTTGCCTCTACAGCTCCATAA 21214
Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078
||||| || || ||||||| | || || ||| ||||| ||| ||||| ||||||
Sbjct 21215 TAAATAGTCTCAAAAATCTGAATGTTTAGTAGTTGGGCTTCTTTACTGTCAAATGGATAA 21274
Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138
| | |||||| || ||||||||||| |||||||| ||||| ||||| |||| |||| |
Sbjct 21275 CGCATAAGAATGAAGGCATCTGCTAGCCCCTGAACACCAATGCCAATTGGTCGATGTTTT 21334
Query 76139 TTATTGGA 76146
|| || ||
Sbjct 21335 TTGTTTGA 21342
Score = 109 bits (120), Expect = 8e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| || |||||||||||||| || ||||| |||| | || || ||||| |||||||
Sbjct 17145 TCCACCCATAGAAATGCATGCTGGTCAGTTTTCCATAATTGGGGTCAGCTATGTGAATAT 17204
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
||| |||||||| ||||| || || ||||||| ||||| |||| || || || |
Sbjct 17205 TCAGAGACTGACTCTGATCAATAAATGCTCCTCGGTCAGCTCCCATCTTGATGATAAGCC 17264
Query 75564 TTTGAGGAATTTCCCAAATAGTT 75586
||| ||||||||||| | ||||
Sbjct 17265 GTTGGGGAATTTCCCACACAGTT 17287
Score = 102 bits (112), Expect = 1e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780
||||||||| || || | || | || | ||| ||||| || || || ||||| | |||
Sbjct 18450 TTGAAATTCACCTGAGAGGACACGACGGGAGTATATATTGCTTGTGTAAGGTTCAATAGA 18509
Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840
||||||||||| | ||| || |||||||||||||| ||||||||||| | | ||| ||
Sbjct 18510 CTCATTGTTTCCAAGAATCTGGGCAGTTGAAGCAGTTGGCATAGGTGCAATGAGTAAGCT 18569
Query 75841 ATTTCTGAGACCATGT 75856
||||| | ||||||
Sbjct 18570 GTTTCTCAAGCCATGT 18585
>seq5418
Length=65370
Score = 131 bits (144), Expect = 2e-25
Identities = 162/221 (73%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| || || | || ||| ||| ||||| |||||||| || |||||||||||
Sbjct 8157 TCATCTCTGCTGATCAGCTCATTACTAAAAGTGAGACCAGGCATCAGGCCACGCTTTTTT 8098
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| || || | || ||||| ||||| || ||||| ||||||||||| || || ||
Sbjct 8097 AGCCAGAAAATTGAAGCAAAAGACCCAGAGAAAAATATTCCTTCTACAGCAGCAAAAGCC 8038
Query 46774 ACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTTGAGCCCAATCAGCC 46830
|||| || ||| || | | || | ||| |||||| | ||||||| || ||
Sbjct 8037 ACAACTCGCTCACCAAATGTTGCTGTAGGATGGCTAATCCAAGTGAGAGCCCAGTCTGCT 7978
Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871
|| ||||||||||| |||| || || || ||||| || ||
Sbjct 7977 TTCTTCTTTACACATGGCAAGGTCTCAATTGCATTGAAAAG 7937
Score = 123 bits (136), Expect = 4e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 47017 TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATAT 47076
|| ||||| ||||| ||||||||||||||||| || ||||| ||||| |||||| | |
Sbjct 6919 TTTTCATTAACTATCCCATCACTAGCAGCAAAGAAAGCCAAGACATGAGAAATAAAGTGT 6860
Query 47077 TTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCA 47136
|||| || | | | | |||||||| | ||| || |||| || ||||||||
Sbjct 6859 CTTTCTTCATCTTTTAACTGTTCCCAGTCATATACATCCTTGGATAAGTCAACTTCTTCT 6800
Query 47137 GCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATC 47196
|||||||| ||||| |||||||| | || ||||| | ||| || || | |||| ||
Sbjct 6799 GCTGTCCAAAATGAAGCCTCTGCCCTCTTGTACATCTGCCAGATGTCTGGGTATTCAATG 6740
Query 47197 GGAAAAATAACAAATCTATTTGGATTTT 47224
||||| || ||||| || | || ||||
Sbjct 6739 GGAAACATTACAAACCTTCTAGGGTTTT 6712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710378592557760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |