Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq70663 113 9e-21 >seq70663 Length=227 Score = 113 bits (124), Expect = 9e-21 Identities = 139/184 (76%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 5636 TGGTCAGAAAATACAGtttttttGTTGTCTAACTTCGTGGCAAACGACCCATAGAGGGCG 5695 ||||||||||| ||| | |||| |||| | ||| |||||||||| ||| ||||||||| Sbjct 45 TGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCG 101 Query 5696 TTGGAGAGTAGCTTGGCAATGCTGCGCATGGTTTGGTTCTTGCTTTTATCTGCCAGCTCT 5755 ||||| || | |||||| ||| ||||| ||||||||| |||| ||| || |||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTGC-GCGATCGGCGCGCTCC 160 Query 5756 TTGGCCTGAATGTTAAGTTGCACATATTCTCTAGCAAGACATTTCCACTCTGGGAATATG 5815 |||||| ||||| || ||||| ||||| | |||| || ||| || ||||| | | Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GGGAA-ACG 218 Query 5816 GTGG 5819 |||| Sbjct 219 GTGG 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100274929972638