Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq629 165 2e-35 seq5467 149 1e-30 seq4435 143 6e-29 seq1156 129 1e-24 seq80409 86.0 1e-11 seq77675 86.0 1e-11 seq10433 86.0 1e-11 seq4682 86.0 1e-11 seq3613 86.0 1e-11 seq3155 86.0 1e-11 seq1598 86.0 1e-11 seq1471 86.0 1e-11 seq887 86.0 1e-11 seq647 86.0 1e-11 seq524 86.0 1e-11 seq1267 84.2 5e-11 >seq629 Length=499154 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||||||||| || ||||||||||||||||||||||| ||| || || |||||||| Sbjct 5946 ACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCC 5887 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 |||||||| || |||||||||| | ||||||||| || || || |||||||||||| Sbjct 5886 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 5827 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 |||||||||||||| | || || ||||| | || ||||| | |||||| || || Sbjct 5826 ATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTT 5767 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||| || || || ||||| Sbjct 5766 CCAGTGAGGGTCTTCACAAAAATTTGCAT 5738 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282869 TGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC 282928 ||| ||||||||||| | | || ||||| || || || ||||| |||||||| || Sbjct 6196 TGATCCACCACGCAGTCTTAAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATC 6137 Query 282929 AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACC 282988 | || || || ||||||||||||||||| || |||||||||| | ||||||||| Sbjct 6136 TGAGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGG 6077 Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048 || || || |||||||||||||||||||||||||| | || || ||||| | || Sbjct 6076 TGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTC 6017 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| | |||||| || || || || | ||||| || || || ||||| Sbjct 6016 CACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966 >seq5467 Length=66102 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| | || || ||||| || || |||||| || || || || |||| | Sbjct 29593 CCACCACGCAGTCTTAGGACAAGATGCAAAGTAGATTCTTTCTGAATATTATAATCAGAA 29652 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| || ||||| || ||||| |||| | ||||||||| ||| Sbjct 29653 AGGGTCCGTCCATCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTGGA 29712 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || ||||||||||||||||||||||| | || || ||||| | ||| || Sbjct 29713 ATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTCTCAATTGTGTCACTTGGTTCCACC 29772 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| || || || || | ||||| || || |||||||| Sbjct 29773 TCCAAAGTGATAGTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || || |||||||| | || ||| |||||||| |||||||||| ||| || || ||| Sbjct 29833 CGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAAAGGGTCCGTCCA 29892 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| |||||||| || ||||| || | | ||| ||||| |||||||| || ||| Sbjct 29893 TCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTTTG 29952 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 ||||| || ||||||||||| | || ||||| || || ||| ||||| ||||| || Sbjct 29953 TCTTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTACTTCCAGAGTAATG 30012 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || | || || || || |||||||| Sbjct 30013 GTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 30047 >seq4435 Length=89394 Score = 143 bits (158), Expect = 6e-29 Identities = 178/241 (74%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| || | || ||||||||||| || || || || || ||||| || | | Sbjct 36043 CCACCACGAAGTCTCAGAACCAGATGTAAAGTAGACTCCTTCTGAATATTGTAATCTGAC 35984 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || ||||| || | || || || |||||||| || | |||||| ||| || Sbjct 35983 AAG-GTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATTAATCTTTGTTGATCAGGTGG 35925 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| |||||||| || ||||| ||| | || || ||||| || || || Sbjct 35924 AATTCCCTCCTTATCTTGGATTTTAGCTTTGACGTTCTCTATGGTGTCGCTAGGCTCTAC 35865 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACAA 283111 || | |||||| ||||| || || | ||||| || |||||||||||||| || ||| | Sbjct 35864 CTCCAAAGTGATTGTCTTGCCTGTTAGCGTCTTTACAAATATCTGCATTTTAATCTACGA 35805 Query 283112 A 283112 | Sbjct 35804 A 35804 >seq1156 Length=327524 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||| ||||| || || ||||| || | Sbjct 17719 ACCACCACGTAGACGTAGAACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGA 17660 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||||| ||||| || || || ||||| || || | ||||| ||| || Sbjct 17659 TAGTGTTCTTCCATCTTCTAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGG 17600 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || || |||||||| ||||| ||||| | || |||||||| || || || Sbjct 17599 AATTCCTTCTTTATCTTGGATTTTTGCCTTTACATTCTCAATAGTGTCACTAGGCTCTAC 17540 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| | || || ||||| || ||||| || || || || ||||||||||| Sbjct 17539 TTCTAAGGTAATAGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCATTTT 17489 >seq80409 Length=1700 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1250 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1306 >seq77675 Length=3689 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 3353 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 3297 >seq10433 Length=18727 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 17184 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 17128 >seq4682 Length=86729 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 79844 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 79788 >seq3613 Length=121273 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1151 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1095 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 3096 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 3040 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 18464 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 18408 >seq3155 Length=145643 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 127596 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 127540 >seq1598 Length=271001 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 127941 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 127997 >seq1471 Length=275221 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 3422 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 3478 >seq887 Length=403026 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 337235 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 337291 >seq647 Length=489208 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 135606 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 135662 >seq524 Length=543868 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 204695 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 204751 >seq1267 Length=316221 Score = 84.2 bits (92), Expect = 5e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 |||||||| || ||||| |||| | || | ||||| || | || || || ||||| Sbjct 206239 TCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCATCTTCCAACTGCTTTCCTGCAAAA 206298 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||||| || || || || |||||||||||||| || || || | Sbjct 206299 ATCAACCTCTGCTGGTCTGGAGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTCACATTT 206358 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| | ||| ||||| || || || || || || || | || || || Sbjct 206359 TCAATTGTGTCACTGGGTTCAACTTCTAGGGTAATGGTTTTGCCGGTAAGGGTTTTCACA 206418 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 206419 AAGATCTGCAT 206429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1042892919846622