Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq70663 167 5e-37 seq73759 82.4 2e-11 >seq70663 Length=227 Score = 167 bits (184), Expect = 5e-37 Identities = 157/191 (82%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 5995 CCATC-TGGTCAGAAAACACAATCTGCTTGTTGTCCAACTTGGTAGCGAACGACCCGTAG 6053 ||||| ||||||||||| ||||||| |||| ||| | |||||| || |||| ||||||| Sbjct 39 CCATCGTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACG-CCCGTAG 95 Query 6054 AGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCTGCGTCTGGTTCTTTTCGCGGTCGGCC 6113 ||||||||||| |||| |||||||||||||||| | || ||||| ||| |||| ||||| Sbjct 96 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGCG 154 Query 6114 TTTTCCTTGGCCGCGATGTTGAGCTGGACGTACTCTCTGGCCACGCACTTCCATCCCGGG 6173 ||||||||||||||||| ||||| ||||| || | || |||||| |||| |||| Sbjct 155 CGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCAT-TCGGG 213 Query 6174 AAGACGGTGGT 6184 || |||||||| Sbjct 214 AA-ACGGTGGT 223 >seq73759 Length=212 Score = 82.4 bits (90), Expect = 2e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 6420 AGGGCCTTCTCCCATTCGTGCACGGCCAGGGCCCGCTCGTAGGGACTCAGGGGCGCCCCC 6479 || |||| || |||| || | |||| || || |||||||| || | || || | ||| Sbjct 52 AGCGCCTGCTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCC 111 Query 6480 CACGGCATGGGGTGTGTCAGCGCCGAAGCATACATCCCGCAGATGTCATACACGTACAGG 6539 || ||||||||||| || ||||| || || ||||| ||||| ||||| | |||| || Sbjct 112 CATGGCATGGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGG 171 Query 6540 GGCTC 6544 ||||| Sbjct 172 GGCTC 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106911450955784