Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq994 149 7e-31
seq3845 113 5e-20
seq5418 107 2e-18
seq6658 98.7 1e-15
>seq994
Length=361151
Score = 149 bits (164), Expect = 7e-31
Identities = 308/450 (68%), Gaps = 19/450 (4%)
Strand=Plus/Minus
Query 128490 CCAGGTAAAAGAAAATGGTTAAAGGTAAAAAGGGATTATTTAAATAATGGATCAATGGCA 128549
||||| ||| || | ||| |||| | |||| ||||| || | ||||| ||||||||
Sbjct 158595 CCAGGAAAACGACATTGGCTAAAAATTAAAAAAGATTACCTAGAAGATGGAGCAATGGCA 158536
Query 128550 GATTCTGCTGATTTAGTTGTGTTGGGTGCATATTATGGTAAAGGTAAAAGATATGGAGGA 128609
||||| |||||| | ||||| | || ||||||| ||| | || || | | || |||
Sbjct 158535 GATTCAGCTGATCTTGTTGTTCTTGGAGCATATTTTGGAACTGGAAATA---AAGGTGGA 158479
Query 128610 ATAAAATCTATATTTCTTATGGGATGTTATGATAAAGAAACAGATACATGGAAAACTGTT 128669
|| | || |||||||| ||||||||||| ||| | | | | |||| ||||||
Sbjct 158478 ATGATGTCAATATTTCTGATGGGATGTTACGATCCTGCTAGTAAAAAATGGTGTACTGTT 158419
Query 128670 ACAAAA-TGC--TCAGGGTTTAATGATGAAACATTAAAAGAATTACAATC---AATTGAT 128723
|||||| ||| ||| | |||||| || || || || | ||| | | ||
Sbjct 158418 ACAAAAGTGCATGGAGGACATGATGATGCTACTTTTGAAAAACTCCAAACTGAGCTGGAC 158359
Query 128724 ATGATTAAAATTAGTAAAAATAAAGATAAAATTCCAAATTGGTT---AATTATTAACAGT 128780
|||| |||||||| || | | |||| |||| |||| | | | | ||| | |
Sbjct 158358 ATGAAAAAAATTAGGAAGGACCCAAGTAAAGTTCCTGCTTGGCTGAAAGTGAATAAAACT 158299
Query 128781 ATTCATTATCCGGATTTTATTATCAAAGATCCAAAATCATCTCCTGTTTGGGAAATAATT 128840
|||| ||| |||||| || || ||||| ||| || || || |||||||| ||
Sbjct 158298 -CTCAT--TCCTGATTTTGTTGCTAATGATCCTAAAAACTCCCCAGTATGGGAAATTGTT 158242
Query 128841 GGATATGAATTTACAAAATCACCATCTCATACAGCGAATGGAATATCAATTAGGTTTCCT 128900
||| |||||||||||| || | |||||||| |||||||| || ||| | |||||
Sbjct 158241 GGAGCAGAATTTACAAAAGCAGAAATCCATACAGCCAATGGAATCTCTATTCGTTTTCCA 158182
Query 128901 AGA--TGCAAAAATATACGAAATGATAAAA 128928
||| ||||||| || ||| |||| ||||
Sbjct 158181 AGAGTTGCAAAA--ATCCGAGATGACAAAA 158154
>seq3845
Length=110360
Score = 113 bits (124), Expect = 5e-20
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||| ||||| || | ||||||| ||||| || || ||||| | |||| || |||
Sbjct 72983 TCATCTCTACTGATAAGTTCATTACTGAATGTCAAACCAGGCATCAGACCTCTCTTCTTA 72924
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||||| |||||||| || |||||||| || ||||| ||||| ||||||||
Sbjct 72923 AGCCAGAATATTGATGCAAATGACCCAGAAAAGAATATGCCCTCCACAGCAGCAAAGGCT 72864
Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712
|||| || |||||| || || || || | ||||| || | ||||| ||
Sbjct 72863 ACAACTCGCTCACCAAAAGTAGCTGTAGGATGACCTATCCAGTTGAGAGCCCAATCTGCT 72804
Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGA 23754
||| || ||||| | ||||||||||| || || |||
Sbjct 72803 TTCTTCTTCACACAAGGCAAGGTTTCAATTGCATTGAAAAGA 72762
Score = 100 bits (110), Expect = 3e-16
Identities = 93/118 (79%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832
||| | || ||||| ||||||| ||||| |||||||| ||||| | ||||||||| |||
Sbjct 72341 TCTCTGATGTATGTGTCAATTAACAAACTGTACATTTCTGAATGGACATTTTCAATGGCA 72282
Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTT 23890
|| || || ||||||||||| |||||||| | | |||||| || | ||||||||
Sbjct 72281 ATTTGGAAACCATAAAAACACCTAGCTTCTGTTACTTGAACTTCCTGGCTAAATCTTT 72224
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957
|||||| |||||||| ||||||||||||||||||||||| || | | ||||| ||
Sbjct 71035 ATTTTCATTAACAATCCCATCACTAGCAGCAAAGAAAGCCAGGATGTGAGAAATAAAGTG 70976
Query 23958 TCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATC 24017
| |||||| | ||| || | ||| | | | ||||| || | ||||||||| ||
Sbjct 70975 TTGTTCATCTTCTTTTAAATTCTCCCACTGTATCAGGTCTTTGGACAGATCAACTTCTTC 70916
Query 24018 AACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTAT 24077
|| ||||| || ||| || ||||||||| |||| || || | || ||
Sbjct 70915 TACAGTCCAGAATGAAGCCTCTGCTTTCTTATACATCTGCCAGATGTCTGGGTATTCAAT 70856
Query 24078 TGGAAATATTACGAATCT 24095
||||| || || |||||
Sbjct 70855 GGGAAAAATAACAAATCT 70838
>seq5418
Length=65370
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958
||||| ||||| || ||||||||||||||||||||||| | |||| ||||| |||
Sbjct 6919 TTTTCATTAACTATCCCATCACTAGCAGCAAAGAAAGCCAAGACATGAGAAATAAAGTGT 6860
Query 23959 CTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCA 24018
||||| ||| | ||| | || ||| |||| | ||| || ||||| |||||||| ||
Sbjct 6859 CTTTCTTCATCTTTTAACTGTTCCCAGTCATATACATCCTTGGATAAGTCAACTTCTTCT 6800
Query 24019 ACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATT 24078
|||||||||| ||| || | ||| ||||| |||| || || | || ||
Sbjct 6799 GCTGTCCAAAATGAAGCCTCTGCCCTCTTGTACATCTGCCAGATGTCTGGGTATTCAATG 6740
Query 24079 GGAAATATTACGAATCT 24095
||||| ||||| || ||
Sbjct 6739 GGAAACATTACAAACCT 6723
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838
|| || || ||||||| |||||||||||||| || |||| ||||||||| ||||| ||
Sbjct 7515 ATGTAGGTGTCAATTAACAAACTATACATTTCTGAGTGAACATTTTCAATGGCAATTTGG 7456
Query 23839 AACCCATAAAAACATCTAGCTTC 23861
|| ||||||||||| ||||||||
Sbjct 7455 AAACCATAAAAACACCTAGCTTC 7433
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||| || || |||| |||||| ||| || | || ||||| | || || |||||
Sbjct 8157 TCATCTCTGCTGATCAGCTCATTACTAAAAGTGAGACCAGGCATCAGGCCACGCTTTTTT 8098
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| || |||| |||||| || || || || || || || || ||||| ||||| |||
Sbjct 8097 AGCCAGAAAATTGAAGCAAAAGACCCAGAGAAAAATATTCCTTCTACAGCAGCAAAAGCC 8038
Query 23653 ACAAGACGTGTACCAAATGTTGC 23675
|||| || ||||||||||||
Sbjct 8037 ACAACTCGCTCACCAAATGTTGC 8015
>seq6658
Length=47451
Score = 98.7 bits (108), Expect = 1e-15
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 23908 ACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 23967
|| || |||||||||||||||||||| || | || | |||||||| |||||||| |||
Sbjct 26440 ACTATTCCATCACTAGCAGCAAAGAAGGCCAACACGTGATTTATAAAGTGTCTTTCTTCA 26499
Query 23968 GTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAA 24027
| | ||| || |||||||| ||| ||||| || || || ||||| ||| | |||||
Sbjct 26500 GGTTTTAACTTGTTCCAATCTGGAATGTCTTTAGACAAGTCCACTTCTTCAGCAGTCCAG 26559
Query 24028 AAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATT 24087
|| ||| || ||| ||||| ||||||||| | | ||||| || |||
Sbjct 26560 AAGGAAGCCTCTGCTTTCTTGTACATATCCCAAATATCTGGGTACTCAATTGGTAAAATT 26619
Query 24088 ACGAATC 24094
|| ||||
Sbjct 26620 ACAAATC 26626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 519618511150200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |