Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2581 84.2 2e-11 >seq2581 Length=3237177 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || ||||| |||| ||||||||||| || || || |||||||| || || Sbjct 740658 ATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATGGCGATTTGG 740599 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||| || || || || || || |||| |||||| |||| ||| | | Sbjct 740598 AAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACTGAATCTTTCAATTAAG 740539 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||||| || || || ||| |||||||| |||||||| | || || || ||| Sbjct 740538 TTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAGATAAAGTAT 740479 Query 16652 TTTTCGTCAGA 16662 | |||||||| Sbjct 740478 CTCTCGTCAGA 740468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511395030179600