Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2981 136 3e-27 >seq2981 Length=868677 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 97399 TGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCT 97458 ||||| | || ||||| || |||||||| ||||||||||||||||| | || ||||| Sbjct 860374 TGATACTTGGCACCAAAGTGTCTCCATTGAAATCCATAAACAGGTCCTAAATCACCTTCC 860433 Query 97459 TCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATG 97518 ||||||||| ||| ||| |||||| | | || || |||||| ||||||| || Sbjct 860434 TCTCTATCAGTGAAGCCACAAGAGTCTAAAAAAGCCCGTGAACCATTTCCATCCCAGATA 860493 Query 97519 TGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAAT 97578 || ||||| |||| | |||||| | || |||||||| |||||||| || ||| Sbjct 860494 TGAACACCTTTATCTGCTAATTCTTTGGAATTTGTCGATCCTCTAATAAACCATAATAAT 860553 Query 97579 TCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 ||||| || || ||| ||| || ||||| ||||| || Sbjct 860554 TCTTCAACTACTGCTCGCCAGAACACTCTTTTAGTGGT 860591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346771193917100