Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2581 107 2e-18 >seq2581 Length=3237177 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 14471 GAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATC 14530 |||||||| || ||||| |||| ||||||||| || || || ||||| || || || Sbjct 740661 GAAATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATGGCGATT 740602 Query 14531 TGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT-GAGTAAAATCTTTCGGC 14589 || |||||||||||||| | ||||||| || ||| ||| || | || |||||| Sbjct 740601 TGGAAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACTGAA-TCTTTCAAT 740543 Query 14590 CAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14649 || ||||||||||| || |||||| ||| ||||| || ||||| | | ||||| Sbjct 740542 TAAGTTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAGATAAA 740483 Query 14650 GTATTGCTCTTCATTGCTGAGTTTTT 14675 |||| ||| ||| |||| |||| Sbjct 740482 GTATCTCTCGTCAGAATTGAGCTTTT 740457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482327331160400