Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2981 84.2 4e-11 >seq2981 Length=868677 Score = 84.2 bits (92), Expect = 4e-11 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 ||| ||||| ||| | || || ||| | || |||||||| | || | | ||||| Sbjct 860198 TCCTGATGACAGACGTATTATAATGTCTGCTTGGAATCCAACTGACATCCCAGAAATGGC 860139 Query 35584 TCTTCCTCCATGCCACATGACT--GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGC 35641 | |||||||||||| | || | |||||||||||| ||||||||||| || Sbjct 860138 ATTGCCTCCATGCCAC--GCCTTAGTCCAATTTTATGTGAGCAATGGAGAATTATCCGCA 860081 Query 35642 CAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATAC 35701 ||| | || ||| |||| | |||| | || || || ||||| || ||||| ||||| || Sbjct 860080 CAGCTTTACCAGAGAAGTGCAGATATGGGTTTAGGGGTGCCGTTTAATATAGCATCGTAT 860021 Query 35702 TCTCTTCTGACT 35713 || | |||||| Sbjct 860020 TCATTACTGACT 860009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989545582493650