Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq2581 104 2e-17
>seq2581
Length=3237177
Score = 104 bits (114), Expect = 2e-17
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 14139 GAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATC 14198
|||||||| || ||||| |||| ||||||||| || || || ||||| || || ||
Sbjct 740661 GAAATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATGGCGATT 740602
Query 14199 TGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCC-GAGTAAAATCTTTCGGC 14257
|| ||||||||||| || | ||||| | || |||||| || | || ||||||
Sbjct 740601 TGGAAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACTGAA-TCTTTCAAT 740543
Query 14258 CAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14317
|| ||||||||||| || |||||| ||| ||||| || ||||| | | |||||
Sbjct 740542 TAAGTTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAGATAAA 740483
Query 14318 GTATTGCTCTTCATTGTTGAGTTTTT 14343
|||| ||| ||| ||||| ||||
Sbjct 740482 GTATCTCTCGTCAGAATTGAGCTTTT 740457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479709830302000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |