Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2581 122 8e-23 >seq2581 Length=3237177 Score = 122 bits (134), Expect = 8e-23 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 13927 GAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATC 13986 |||||||| || ||||| |||| ||||||||| || || || |||||||| || || Sbjct 740661 GAAATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATGGCGATT 740602 Query 13987 TGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCTTTCTGC 14045 || |||||||||||||| | ||||||| || ||| || || | |||||||| Sbjct 740601 TGGAAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACT-GAATCTTTCAAT 740543 Query 14046 CAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14105 ||||||||||||||||| |||||| ||| ||||| || ||||| | | ||||| Sbjct 740542 TAAGTTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAGATAAA 740483 Query 14106 GTATTGCTCTTCATTGTTGAGTTTTT 14131 |||| ||| ||| ||||| |||| Sbjct 740482 GTATCTCTCGTCAGAATTGAGCTTTT 740457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478570673449200