Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq2581 114 1e-20 >seq2581 Length=3237177 Score = 114 bits (126), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 13403 TTTTCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATA 13462 ||||| || ||| |||| ||||| || || | || ||||||||||||||||||| Sbjct 740676 TTTTCTTTCGGGTCAGAAATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATA 740617 Query 13463 TTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC-GGA 13521 ||||| || || |||||||||||||||||||| | || |||| | | ||||| || Sbjct 740616 TTTTCTATGGCGATTTGGAAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGA 740557 Query 13522 GTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 | |||||||| ||||||||| ||||| || || ||| ||||||||| || || Sbjct 740556 CT-GAATCTTTCAATTAAGTTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGC 740501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430966484628060