Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2581 84.2 2e-11
>seq2581
Length=3237177
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 21769 ATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTC 21828
||||||||| ||||| ||||||||||| || || || || || |||||||| | ||| ||
Sbjct 740635 ATACATTTCTGAATGAATATTTTCTATGGCGATTTGGAAACCATAAAAACAGCGTGCTTC 740576
Query 21829 TGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACT 21888
|| || || || | |||| || | ||||||||||| || |||||||||
Sbjct 740575 TGCGATTTTTACTTCTTGACTGAATCTTTCAATTAAGTTTTCATTAACAATTCCATCAGA 740516
Query 21889 GGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGT 21932
|| ||||| || ||||| | || ||||| |||| ||||
Sbjct 740515 AGCAGCAAAGAACGCCAAAACATGAGAGATAAAGTATCTCTCGT 740472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531880654257200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |