Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2981 111 4e-19 >seq2981 Length=868677 Score = 111 bits (122), Expect = 4e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 111357 GTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAA 111416 || |||||| | | ||||||||| | ||| |||||| | || ||| | |||| ||| Sbjct 860561 GTTGAAGAATTATTATGGTTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAA 860502 Query 111417 AATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC 111476 ||| | || |||||||||||||| ||||| | ||| |||| || ||| ||| | Sbjct 860501 GGTGTTCATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGG-CTTCAC 860443 Query 111477 -GACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 || | || ||||||||| | ||||| ||||| |||||||||||| | ||||||||||| Sbjct 860442 TGATAGAGAGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACACTTTGGTGC 860383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303303001369460