Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq2981 120 4e-22 >seq2981 Length=868677 Score = 120 bits (132), Expect = 4e-22 Identities = 163/222 (73%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 104862 TTAAAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTG 104921 || |||||||||||||| | || | ||| | |||||||| || ||| || | | Sbjct 860560 TTGAAGAATTATTATGGTTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAG 860501 Query 104922 GTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACT 104981 ||||| | | ||| ||| ||||||||||| |||||||| |||||||| || |||| Sbjct 860500 GTGTTCATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTT-CACT 860442 Query 104982 T-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCT 105040 | || | ||||||||||||||||| |||||||||||||||||||||| ||| || Sbjct 860441 GATAGAGAGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACACTTTGGTGCC 860382 Query 105041 CAATATATCGACTGTG-ATACCGACTATACCGGCCAAGGTAT 105081 | ||| || | || | || || ||||| | |||||||| Sbjct 860381 AAGTATCAGGA-TATGCACACAGATTATACTAGACAAGGTAT 860341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658378262978800