Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2680 105 8e-18
>seq2680
Length=870558
Score = 105 bits (116), Expect = 8e-18
Identities = 171/245 (70%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| ||||| ||||| | ||||| || |||||||| || ||||||||||| ||||| ||
Sbjct 615653 ACTCCAATGGGACCCATACCAGGCCCGCCACCTCCGTGAGGAATACAGAAGGTCTTGTGC 615594
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|| || ||||| | || || ||||| || | || |||||| ||||| |||
Sbjct 615593 AAGTTGAGATGCGACACGTCGCTGCCATAATCGCCGGGACGACATAGACCAACCTGAGCA 615534
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCAC---CATTGTCATGAACGATCTTACAT 138359
|| | || || || || | ||| || || || | ||||| || || || ||||||
Sbjct 615533 TTCATGTTGGCGCCGTCTAAATACACTTGTCCGCCGACATTG---TGCACCATGTTACAT 615477
Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419
|| | | ||| || ||||| ||||| | ||||| |||||||| ||||| | |||
Sbjct 615476 ATGTCGCCGATCGTTTCCTCAAACACACCGTTCGTCGACGGATATGTTATCATCAAACAC 615417
Query 138420 GAGAG 138424
|| ||
Sbjct 615416 GATAG 615412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578976470435600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |