Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq2981 132 6e-26 >seq2981 Length=868677 Score = 132 bits (146), Expect = 6e-26 Identities = 129/166 (78%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||| | |||||| |||||| ||| || || |||| ||| ||||| |||| ||||| Sbjct 860557 AAGAATTATTATGGTTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAGGTG 860498 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || | | ||| ||| |||||||| || | |||||||| | || || || ||||| | Sbjct 860497 TTCATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTGATA 860438 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACA 172564 || | |||||||||||||| || |||||||||||||||||||||| Sbjct 860437 GAGAGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACA 860392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632465644456400