Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq2981 116 5e-21 >seq2981 Length=868677 Score = 116 bits (128), Expect = 5e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 180423 TTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTG 180482 || |||||||||||||| | || | ||| | |||||||| || ||| |||| | Sbjct 860560 TTGAAGAATTATTATGGTTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAG 860501 Query 180483 GTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATT 180542 ||||| | | ||| ||| |||||||| || |||||||| |||||||| || | Sbjct 860500 GTGTTCATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTG 860441 Query 180543 TTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACA 180591 | || | ||||||||||||||||| |||||||||||||||||||||| Sbjct 860440 ATAGAGAGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACA 860392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655255181270000