Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq2981 134 2e-26 >seq2981 Length=868677 Score = 134 bits (148), Expect = 2e-26 Identities = 131/169 (78%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667 || ||||| | |||||| |||||| ||| || || |||| ||| ||||| |||| || Sbjct 860560 TTGAAGAATTATTATGGTTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAG 860501 Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727 ||||| | | ||| ||| |||||||| || | |||||||| | || || || |||| Sbjct 860500 GTGTTCATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTG 860441 Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACA 171776 | ||| | |||||||||||||| || |||||||||||||||||||||| Sbjct 860440 ATAGAGAGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACA 860392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628507394380800