Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 95.1 1e-14
>seq2959
Length=3411269
Score = 95.1 bits (104), Expect = 1e-14
Identities = 140/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Plus
Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGCAA 146437
|| || |||||||| || | || || ||||| | | |||| | ||||| |||
Sbjct 2914678 AAAGTCGCGCAATTGGCGGGATCGGTCGCCGAGCACTCGGCTTACCATCACGGCGAGACG 2914737
Query 146438 AACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCC 146497
| || | |||||| || || |||||||| ||| |||||||||||||| |||
Sbjct 2914738 TCCCTGATGGCGACCATAATCAATCTCGCGCAGAATTACGTGGGCAGCAATAACATCAAT 2914797
Query 146498 CTTCTCTACCAGATGGG-CAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGT 146556
|| || | | ||| || || ||||| |||||| | ||||| |||||||| || |||
Sbjct 2914798 CTGCTTCAGCCGATCGGTCAGTTCGGTACAAGGCTAACCGGAGGCAAGGACGCCGCCAGT 2914857
Query 146557 CCCAGATATATTTTCAC 146573
|| ||||||||||||||
Sbjct 2914858 CCGAGATATATTTTCAC 2914874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521525846460400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |