Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq2959 95.1 1e-14 >seq2959 Length=3411269 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGCAA 146437 || || |||||||| || | || || ||||| | | |||| | ||||| ||| Sbjct 2914678 AAAGTCGCGCAATTGGCGGGATCGGTCGCCGAGCACTCGGCTTACCATCACGGCGAGACG 2914737 Query 146438 AACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCC 146497 | || | |||||| || || |||||||| ||| |||||||||||||| ||| Sbjct 2914738 TCCCTGATGGCGACCATAATCAATCTCGCGCAGAATTACGTGGGCAGCAATAACATCAAT 2914797 Query 146498 CTTCTCTACCAGATGGG-CAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGT 146556 || || | | ||| || || ||||| |||||| | ||||| |||||||| || ||| Sbjct 2914798 CTGCTTCAGCCGATCGGTCAGTTCGGTACAAGGCTAACCGGAGGCAAGGACGCCGCCAGT 2914857 Query 146557 CCCAGATATATTTTCAC 146573 || |||||||||||||| Sbjct 2914858 CCGAGATATATTTTCAC 2914874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521525846460400