Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2812 89.7 1e-12
>seq2812
Length=584538
Score = 89.7 bits (98), Expect = 1e-12
Identities = 165/237 (70%), Gaps = 14/237 (6%)
Strand=Plus/Plus
Query 72169 ACTTTGCCAAACACAACGTGTTTGTTATTTA---AATGTGGTTGAGGTGCAAGT-GTAAT 72224
|| |||||||||||||| ||||| || | | || ||| || | ||| |||||
Sbjct 464109 ACATTGCCAAACACAACATGTTTATTGTCCAGCCAAGGTGTTT----TTATAGTAGTAAT 464164
Query 72225 GAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTC 72284
|| ||||| ||| ||||||| | || || ||||||||||| || | | ||| | |
Sbjct 464165 AAAAAATTGTGAGCTATTTGAGTTTGGGCCAGAGTTAGCCATTGACAGTATACCACCACC 464224
Query 72285 TGAATGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCAT--ATATACTTT-GACC 72341
| |||||| | | || |||||||||||||| | ||||||| ||| ||||| |||
Sbjct 464225 AGTATGCTTGAGTTCAAAGTTCTCATCTTCAAATTTATCTCCATAGATAGACTTTCCACC 464284
Query 72342 TGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTAC 72398
|| | |||| | ||||||||||||||| ||||||||| ||||||
Sbjct 464285 TG---TACCATTGTGATGTGTGATATCACCTCCTTGACACATAAAATTGGGAATTAC 464338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186766725701830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |