Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2927 224 3e-53
seq3008 215 2e-50
seq2987 181 3e-40
seq2856 172 2e-37
seq2783 104 7e-17
seq2953 100 9e-16
seq2963 96.9 1e-14
seq2981 95.1 4e-14
seq2838 93.3 1e-13
seq2851 84.2 7e-11
>seq2927
Length=4912583
Score = 224 bits (248), Expect = 3e-53
Identities = 738/1141 (65%), Gaps = 11/1141 (1%)
Strand=Plus/Plus
Query 349505 TATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563
|| ||||| || || || || || || |||||||| | || || |||||||| ||
Sbjct 2841569 TACAAAGGCGAGACGAAGACT-TTCTTCCCCGAAGAGGTGTCCTCTATGGTTTTGACGAA 2841627
Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623
|||||||||| || ||||||||| | || | || || || | || || || |||||
Sbjct 2841628 GATGAAGGAAACGGCGGAAGCATATCTGGGCAAGACTGTTACGAACGCCGTCATCACTGT 2841687
Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683
|||||| ||||| |||||| | ||| | || || || || || ||| || || ||
Sbjct 2841688 ACCAGCTTATTTCAATGATTCTCAGAGGCAAGCGACGAAGGACGCCGGCGCTATCGCCGG 2841747
Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGA 349743
|| |||||||| || || || || || || || || || || || || || || || ||
Sbjct 2841748 TTTGAATGTTCTCAGGATAATAAACGAGCCGACGGCAGCTGCGATAGCGTACGGTCTCGA 2841807
Query 349744 TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGA 349803
||| | | | || || || | || || || || || ||||| ||||| |||||
Sbjct 2841808 TAAGAAAACTTCAGGCGAGAAGAACGTCCTGATCTTCGACTTGGGTGGAGGTACCTTTGA 2841867
Query 349804 TGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATAC 349863
||| || | || ||| ||||||| || || ||||| || ||| | || || || || ||
Sbjct 2841868 TGTGTCGATCCTGACAATTGAAGACGGCATCTTTGAGGTGAAATCTACGGCCGGCGACAC 2841927
Query 349864 ACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923
||||| || ||||| || ||||| ||||| | || || ||||| ||||||| ||
Sbjct 2841928 GCATCTCGGCGGAGAGGACTTTGACAATCGAATGGTGAATCACTTTGTGCAAGAATTCAA 2841987
Query 349924 GCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGC 349983
| | | |||| || | | || ||||| || | ||||| || || ||
Sbjct 2841988 GAGGAAGTACAAAAAGGACTTGAGCACCAACAAGAGAGCCCTGAGACGCCTGAGGACGGC 2842047
Query 349984 GTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTC 350043
|| || | || || | | || || | || || | ||||| ||||| ||
Sbjct 2842048 CTGCGAGAGGGCGAAAAGAACATTGAGCTCGTCGACGCAGGCGAGCATTGAGATTGACTC 2842107
Query 350044 TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATG 350103
|| || || | || |||| | || || || | || | ||||| ||| | ||
Sbjct 2842108 GCTGTTCGAGGGTATCGACTTCTACACGTCCATCACTAGGGCCAGATTTGAGGAACTCTG 2842167
Query 350104 TATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAAT 350163
||| | || ||| || | || |||||||| |||| | | || || || ||
Sbjct 2842168 CGCCGATATGTTCAGAAGCACCCTCGAACCTGTGGAGAAAGCGCTGAGGGACGCGAAGAT 2842227
Query 350164 GTCCAAAAATCAGATTGATGAAG--TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAA 350221
| ||| || | | ||| ||||| |||| ||||| ||||| | || |||||
Sbjct 2842228 GGACAAGGCACA-AGTACACAAGCATAGTTCTAGTCGGTGGCTCTACCAGGATACCAAAG 2842286
Query 350222 GTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCA 350281
|||| || | || || || || || ||||| |||| || ||| || |||||
Sbjct 2842287 ATTCAGAAGCTGCTTCAAGATTTCTTCAACGGCAAGGAACTGAATAAATCCATCAATCCG 2842346
Query 350282 GATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGT 350341
|| || |||||||| || || || || ||||||||| ||||| | || | |||
Sbjct 2842347 GACGAGGCTGTTGCCTACGGCGCAGCGGTTCAGGCAGCTATTCTGCACGGCGACAAG--- 2842403
Query 350342 TCTAAA---ATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAA 350398
||| || || | ||||| | || || || || ||||| || ||||| || | ||
Sbjct 2842404 TCTGAAGAGGTTCAAGATCTGCTTCTGCTGGACGTGACTCCGCTGTCGCTGGGCATTGAG 2842463
Query 350399 ACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAG 350458
|| |||| | || ||||| | | || || || | || |||| || || ||
Sbjct 2842464 ACGGCTGGCGGTGTCATGACCACTTTGATCAAGAGGAACACCACGATACCCACGAAGCAG 2842523
Query 350459 TCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAA 350518
| || || ||| | || | | | || |||||||| | ||| |||||||| | ||
Sbjct 2842524 ACGCAGACGTTTACCACGTATTCCGACAATCAGCCGGGAGTACTTATTCAAGTCTACGAG 2842583
Query 350519 GGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATT 350578
|| || | || || || || || || | ||||| ||||| || | | |||
Sbjct 2842584 GGAGAGAGAGCGATGACCAAGGACAACAACATCCTTGGTAAATTTGAGCTGACGGGAATA 2842643
Query 350579 CCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGT 350638
||||| |||||| || || || || |||||||| | ||||| || || | ||||||
Sbjct 2842644 CCACCTGCGCCTAGGGGCGTACCGCAAATTGAAGTTACCTTCGACATCGACGCCAATGGT 2842703
Query 350639 A 350639
|
Sbjct 2842704 A 2842704
>seq3008
Length=1134530
Score = 215 bits (238), Expect = 2e-50
Identities = 187/232 (81%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | || | ||| | ||| ||||| || ||||||||||| || |||||
Sbjct 387395 CATACCACCGCGAAGCCTCAAAACCAAATGCAGAGTGGATTCTTTTTGAATGTTGTAATC 387454
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | ||||| ||||||||||||||||||||||||||||| | ||| |||||||| ||
Sbjct 387455 GGAGAGCGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGATCCGG 387514
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| ||||||||||| || |||||||||||||| ||||| || || | ||| |||| ||
Sbjct 387515 AGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTGACATTCTCGATAGTATCTGATGCCTC 387574
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|||||| | || | || || || ||||| ||||| || ||||||||||||
Sbjct 387575 AACTTCTAACGTGATGGTTTTCCCTGTTAGAGTTTTGACGAAAATCTGCATT 387626
Score = 203 bits (224), Expect = 1e-46
Identities = 184/232 (79%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | ||| ||||| | ||| | |||||| || || || || || |||||
Sbjct 388538 CATTCCACCACGCAGTCTGAGAACCAAATGCAAAGTAGATTCCTTCTGGATGTTGTAATC 388597
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || || || ||||||||||| |||||||| ||||| || | ||| |||||||| ||
Sbjct 388598 GGACAAAGTGCGACCATCTTCAAGCTGTTTTCCGGCAAAAATCAAACGCTGCTGATCGGG 388657
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || |||||||| |||||||| ||||||||||| ||||| | |||||| | |||
Sbjct 388658 TGGAATACCCTCTTTATCTTGAATTTTGGCTTTTACATTCTCAATAGTATCAGAAGCTTC 388717
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
||||||||| || | || || || || | ||| || ||||| |||||||||
Sbjct 388718 AACTTCAAGAGTTATAGTTTTCCCAGTCAATGTCTTCACAAAGATCTGCATT 388769
Score = 201 bits (222), Expect = 3e-46
Identities = 183/231 (79%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | |||| ||| ||||| | ||| || || ||||| |||||||||||
Sbjct 387623 CATTCCACCGCGAAGCCTTAAAACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATC 387682
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| || || ||||| ||||| ||||| ||||||||||| || | ||| |||||||||||
Sbjct 387683 AGACAAAGTGCGCCCGTCTTCCAGTTGCTTTCCAGCAAAAATCAAACGCTGCTGATCAGG 387742
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || |||||||| ||||| || ||||||||||| ||||| | |||||| | ||
Sbjct 387743 TGGGATACCCTCTTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTATCAGAAGACTC 387802
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || | || || ||||| || ||||| || |||||||||||
Sbjct 387803 GACTTCCAGCGTGATGGTTTTACCGGTAAGAGTTTTAACGAAAATCTGCAT 387853
Score = 199 bits (220), Expect = 1e-45
Identities = 185/235 (79%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||| || || | | || ||| | ||| |||||||| ||||| |||||||| |
Sbjct 388078 TTTGCATACCTCCGCGAAGCCGTAAAACTAAATGCAGAGTAGATTCTTTCTGAATATTGT 388137
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | ||| || || |||||||| |||||||| |||||||| | ||| |||||||
Sbjct 388138 AATCGGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAACGCTGCTGAT 388197
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || ||||| || |||||||| || || || || ||||| | ||| ||||
Sbjct 388198 CCGGAGGGATGCCCTCTTTGTCTTGAATTTTTGCCTTAACGTTCTCAATTGTATCTGATG 388257
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| | |||| |||||||| ||||| ||||| || |||||||||||
Sbjct 388258 CTTCGACTTCTAACGTAATGGTCTTTCCTGTTAGAGTTTTGACGAAAATCTGCAT 388312
Score = 194 bits (214), Expect = 5e-44
Identities = 182/232 (78%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | ||| ||||| | ||| | |||||| || || || ||||| |||||
Sbjct 388310 CATACCACCGCGCAGTCTGAGAACCAAATGCAAAGTAGATTCCTTCTGGATATTGTAATC 388369
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| || || || |||||||||||||||||||||||||| || | | |||||||| ||
Sbjct 388370 AGACAAAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGCTGATCCGG 388429
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || |||||||| || |||||||| || || ||||| || || | || |||| |||
Sbjct 388430 AGGGATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTCTCGATTGTGTCTGATGCTTC 388489
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|||||| | || | |||||||| || | ||||| || ||||||||||||
Sbjct 388490 AACTTCCAACGTTATGGTCTTTCCTGTCAAGGTTTTAACGAAAATCTGCATT 388541
Score = 185 bits (204), Expect = 3e-41
Identities = 168/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||||||||| ||||| || ||||||||||| || || ||||| || || |||||
Sbjct 387186 AGCACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGATAAAGTGCGTCCATCC 387245
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| ||||| || || ||||| || || | ||| |||||||||||||| || ||||||||
Sbjct 387246 TCGAGTTGCTTGCCTGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCCTCTTTATCT 387305
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || || || || || ||||| | |||||| | || ||||| | ||||| |||
Sbjct 387306 TGAATCTTTGCCTTCACGTTCTCAATGGTATCAGAAGCCTCGACTTCCAATGTAATCGTC 387365
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| |||| ||||| || |||||||||||
Sbjct 387366 TTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 387397
Score = 181 bits (200), Expect = 3e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
|||||| || | || | ||| | ||||||||| || |||||||||||||| ||||| ||
Sbjct 387857 ACCACCGCGAAGCCTCAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTGTAATCTGA 387916
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| ||||| |||||||| ||||||||||| |||||||| | ||| || ||||| |||||
Sbjct 387917 GAGCGTTCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAAACGCTGTTGATCCGGAGG 387976
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|||||||| || ||||||||||| || || || || || || | || |||| || ||
Sbjct 387977 GATTCCTTCCTTGTCCTGAATTTTTGCCTTGACGTTCTCGATTGTGTCTGATGCCTCGAC 388036
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| | || | || ||||| || || ||||| |||||||| |||||
Sbjct 388037 TTCTAAAGTGATGGTTTTTCCTGTAAGAGTTTTCACAAAAATTTGCAT 388084
>seq2987
Length=818656
Score = 181 bits (200), Expect = 3e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || || ||||| || || || |||||||| ||||| || || | |||| ||||||
Sbjct 733553 AGTACCAGGTGAAGTGTGGATTCCTTTTGAATGTTATAGTCTGAAAGAGTTCTGCCATCT 733494
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| |||||||| || || || || ||||| ||||||||||||||||| |||||||| |||
Sbjct 733493 TCCAGTTGTTTGCCGGCGAAAATCAGACGCTGCTGATCAGGAGGAATACCTTCTTTGTCC 733434
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| ||||| ||||||||||| || |||| ||||| | ||| ||||| || || | |||
Sbjct 733433 TGGATTTTGGCTTTTACATTTTCGATCGTGTCAGAAGCTTCGACTTCGAGCGTGATGGTC 733374
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || || |||||||| || ||||||
Sbjct 733373 TTGCCCGTAAGAGTCTTTACAAAGATTTGCATT 733341
Score = 176 bits (194), Expect = 1e-38
Identities = 165/209 (79%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || || || || || |||||||| ||||| || || | |||| |||||||| |
Sbjct 733776 CAAG-TGGAGCGTGGATTCCTTTTGAATGTTATAGTCCGAAAGAGTTCTGCCATCTTCCA 733718
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
||||||| || || || || ||||||||||||||||||||||| |||||||| ||||| |
Sbjct 733717 GTTGTTTGCCGGCGAAAATCAGACGTTGCTGATCAGGAGGAATACCTTCTTTGTCCTGGA 733658
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
|||| |||||||| || || |||| || || | ||| ||||| ||||| | || || |
Sbjct 733657 TTTTGGCTTTTACGTTTTCGATCGTGTCGGAAGCTTCGACTTCGAGTGTGATGGTTTTGC 733598
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || |||||||| || || |||||||||
Sbjct 733597 CTGTGAGTGTTTTCACGAAGATCTGCATT 733569
Score = 154 bits (170), Expect = 4e-32
Identities = 160/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 140528 AACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTC 140587
||| | ||| || || || || ||||| || |||||||| || | |||| || |||||
Sbjct 733323 AACCAAATGGAGTGTGGATTCCTTTTGGATGTTATAATCTGAAAGAGTTCTGCCGTCTTC 733264
Query 140588 AAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647
| |||||| ||||| ||||| ||||| ||||||||||||||||| || |||||||| ||
Sbjct 733263 CAATTGTTTACCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCCTCTTTATCTTG 733204
Query 140648 AATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTT 140707
|| || ||||| ||||| || || | ||||| | ||| || ||||| || | || ||
Sbjct 733203 GATCTTGGCTTTGACATTTTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATAGTTTT 733144
Query 140708 TCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || || ||||| || |||||
Sbjct 733143 TCCAGTGAGGGTCTTCACAAAGATTTGCAT 733114
>seq2856
Length=4748033
Score = 172 bits (190), Expect = 2e-37
Identities = 152/190 (80%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607
||||||| ||||||||||| || | || || |||||||| || || || ||||| ||||
Sbjct 1621063 CTTTTTGGATATTATAATCTGAAAGAGTACGTCCATCTTCCAGCTGCTTGCCAGCGAAGA 1621004
Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667
| || || ||||||||||| |||||||| ||||||||||| || || ||||||||||| |
Sbjct 1621003 TAAGTCGCTGCTGATCAGGTGGAATTCCCTCTTTATCCTGTATCTTGGCTTTTACATTTT 1620944
Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727
| || | ||| || | ||| || || || |||| ||||| || || || |||||||| |
Sbjct 1620943 CTATAGTATCCGACGATTCTACCTCGAGGGTAATAGTCTTACCCGTGAGGGTTTTTACGA 1620884
Query 140728 AAATCTGCAT 140737
||||||||||
Sbjct 1620883 AAATCTGCAT 1620874
>seq2783
Length=2925630
Score = 104 bits (114), Expect = 7e-17
Identities = 122/164 (74%), Gaps = 1/164 (1%)
Strand=Plus/Plus
Query 130659 GACATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACAT 130718
||||| ||||| || | ||| || || | ||||||| || | |||||| || ||||
Sbjct 2360545 GACATTCCATAAAAAAGTTTGTATTTCTTCCCATTTTTCTCTATAACTTCGCCTCCACAC 2360604
Query 130719 TCATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCT 130778
|| || || | || |||||||| || ||||||||| || || || || |||||||||
Sbjct 2360605 TCGTCGTGGCCCGCGAACATTCCACCTGCCATAACAAAGTCCGCACCGGCACCAAATGCT 2360664
Query 130779 TTCGCAATATCCCCGGGAGATTTACAACCCCCAT-CAGCAATAA 130821
||||| | ||| |||||| | |||| || |||| | |||||||
Sbjct 2360665 TTCGCCAAATCTCCGGGACAAGTACAGCCGCCATCCTGCAATAA 2360708
>seq2953
Length=635362
Score = 100 bits (110), Expect = 9e-16
Identities = 136/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|||||||| |||| || | || || ||| | |||| | |||| |||||||||
Sbjct 617335 AAAATGAAAGAAACAGCAGCGGCTTACTTAAATACTTCAGTGAAAAATGCGGTTATTACT 617394
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT-GGCAGCATTGC 349680
|||||||| |||||||| ||| | || || || |||||||||||| ||||| ||| |
Sbjct 617395 GTACCAGCGTATTTTAACGATTCTCAACGACAAGCCACAAAAGATGCTGGGCAG-ATTTC 617453
Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740
|| || || || || || | ||||| ||||| || || || ||| ||||||| || |
Sbjct 617454 TGGATTGAACGTGCTTCGAGTAATTAACGAACCAACCGCAGCTGCACTTGCATACGGCAT 617513
Query 349741 TGATAAA 349747
||||||
Sbjct 617514 GGATAAA 617520
>seq2963
Length=1349199
Score = 96.9 bits (106), Expect = 1e-14
Identities = 128/171 (75%), Gaps = 9/171 (5%)
Strand=Plus/Minus
Query 377421 TTTTGGATTTTCAGATAATGATAAT-ATTTCTT-CAATGCGTGGCACACCACGTGTAACA 377478
||| || |||| | |||| |||| ||||||| |||| || |||||||| | || ||
Sbjct 1232953 TTTCGGTTTTTTAC-TAATATTAATGATTTCTTTCAAT-CGAGGCACACCGAGAGTTACG 1232896
Query 377479 TTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGC 377538
||| || |||| ||||| |||||||||||||| || || || | ||||| | ||||
Sbjct 1232895 TTC---TTCGATGACACACCGGCAAAGTGGAAAGTGTTCAGTGTCATCTGAGTGGCGGGC 1232839
Query 377539 TCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCTCCAGGATTGACA 377589
|| || | ||||||||||| | | |||| |||||||| || || |||||
Sbjct 1232838 TCGCCGAGAGACTGCGCTGCCAAAGCGCCGACCATTTCACCGGG--TGACA 1232790
>seq2981
Length=868677
Score = 95.1 bits (104), Expect = 4e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 390772 ATATATGGGATGGAAACGGTTCAAGAGATTTTTTAGATAGTAGAGGCTTAACTAATTTAG 390831
|||| ||||||||||| |||||| | | ||||||||| | | ||||| ||| || ||
Sbjct 860494 ATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTGATAGAG 860435
Query 390832 AAGAAGATGATTTAGGGCCAGTATATGGACATCAATGGAGACATTTT 390878
| |||| ||||||||| || || |||||| |||||||||||| |||
Sbjct 860434 AGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACACTTT 860388
>seq2838
Length=268038
Score = 93.3 bits (102), Expect = 1e-13
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600
||||| || ||||| ||||||||||| || || || | |||||||| | |||||| |||
Sbjct 122064 GTAGATTCCTTTTGTATATTATAATCGGACAAAGTCCTACCATCTTCTAATTGTTTGCCA 122005
Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCT 140636
|||||||| | || |||||||| || |||||||||
Sbjct 122004 GCAAAGATCAATCGCTGCTGATCTGGTGGAATTCCT 121969
Score = 84.2 bits (92), Expect = 7e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693
||||||||||| |||||||| || || ||||| || |||| |||||| | ||||| ||
Sbjct 121613 CCTTCTTTATCTTGAATTTTTGCCTTCACATTTTCGATCGTATCAGACGCCTCAACCTCG 121554
Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || || || || || ||||| ||||| ||||||||
Sbjct 121553 AGGGTGATGGTTTTCCCCGTAAGAGTTTTCACAAAGATCTGCAT 121510
>seq2851
Length=1908893
Score = 84.2 bits (92), Expect = 7e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943
||| | ||||| |||| ||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 41446 ATAGAAGGGGACGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACCGGGA 41505
Query 235944 TCAAAACCCAGCATCTCCA 235962
|| | ||| || ||||||
Sbjct 41506 TCGATGCCCGGCGTCTCCA 41524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515195574983090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |