Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2927 224 3e-53 seq3008 215 2e-50 seq2987 181 3e-40 seq2856 172 2e-37 seq2783 104 7e-17 seq2953 100 9e-16 seq2963 96.9 1e-14 seq2981 95.1 4e-14 seq2838 93.3 1e-13 seq2851 84.2 7e-11 >seq2927 Length=4912583 Score = 224 bits (248), Expect = 3e-53 Identities = 738/1141 (65%), Gaps = 11/1141 (1%) Strand=Plus/Plus Query 349505 TATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAA 349563 || ||||| || || || || || || |||||||| | || || |||||||| || Sbjct 2841569 TACAAAGGCGAGACGAAGACT-TTCTTCCCCGAAGAGGTGTCCTCTATGGTTTTGACGAA 2841627 Query 349564 AATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGT 349623 |||||||||| || ||||||||| | || | || || || | || || || ||||| Sbjct 2841628 GATGAAGGAAACGGCGGAAGCATATCTGGGCAAGACTGTTACGAACGCCGTCATCACTGT 2841687 Query 349624 ACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGG 349683 |||||| ||||| |||||| | ||| | || || || || || ||| || || || Sbjct 2841688 ACCAGCTTATTTCAATGATTCTCAGAGGCAAGCGACGAAGGACGCCGGCGCTATCGCCGG 2841747 Query 349684 GTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGA 349743 || |||||||| || || || || || || || || || || || || || || || || Sbjct 2841748 TTTGAATGTTCTCAGGATAATAAACGAGCCGACGGCAGCTGCGATAGCGTACGGTCTCGA 2841807 Query 349744 TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGA 349803 ||| | | | || || || | || || || || || ||||| ||||| ||||| Sbjct 2841808 TAAGAAAACTTCAGGCGAGAAGAACGTCCTGATCTTCGACTTGGGTGGAGGTACCTTTGA 2841867 Query 349804 TGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATAC 349863 ||| || | || ||| ||||||| || || ||||| || ||| | || || || || || Sbjct 2841868 TGTGTCGATCCTGACAATTGAAGACGGCATCTTTGAGGTGAAATCTACGGCCGGCGACAC 2841927 Query 349864 ACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAA 349923 ||||| || ||||| || ||||| ||||| | || || ||||| ||||||| || Sbjct 2841928 GCATCTCGGCGGAGAGGACTTTGACAATCGAATGGTGAATCACTTTGTGCAAGAATTCAA 2841987 Query 349924 GCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGC 349983 | | | |||| || | | || ||||| || | ||||| || || || Sbjct 2841988 GAGGAAGTACAAAAAGGACTTGAGCACCAACAAGAGAGCCCTGAGACGCCTGAGGACGGC 2842047 Query 349984 GTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTC 350043 || || | || || | | || || | || || | ||||| ||||| || Sbjct 2842048 CTGCGAGAGGGCGAAAAGAACATTGAGCTCGTCGACGCAGGCGAGCATTGAGATTGACTC 2842107 Query 350044 TCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATG 350103 || || || | || |||| | || || || | || | ||||| ||| | || Sbjct 2842108 GCTGTTCGAGGGTATCGACTTCTACACGTCCATCACTAGGGCCAGATTTGAGGAACTCTG 2842167 Query 350104 TATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAAT 350163 ||| | || ||| || | || |||||||| |||| | | || || || || Sbjct 2842168 CGCCGATATGTTCAGAAGCACCCTCGAACCTGTGGAGAAAGCGCTGAGGGACGCGAAGAT 2842227 Query 350164 GTCCAAAAATCAGATTGATGAAG--TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAA 350221 | ||| || | | ||| ||||| |||| ||||| ||||| | || ||||| Sbjct 2842228 GGACAAGGCACA-AGTACACAAGCATAGTTCTAGTCGGTGGCTCTACCAGGATACCAAAG 2842286 Query 350222 GTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCA 350281 |||| || | || || || || || ||||| |||| || ||| || ||||| Sbjct 2842287 ATTCAGAAGCTGCTTCAAGATTTCTTCAACGGCAAGGAACTGAATAAATCCATCAATCCG 2842346 Query 350282 GATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGT 350341 || || |||||||| || || || || ||||||||| ||||| | || | ||| Sbjct 2842347 GACGAGGCTGTTGCCTACGGCGCAGCGGTTCAGGCAGCTATTCTGCACGGCGACAAG--- 2842403 Query 350342 TCTAAA---ATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAA 350398 ||| || || | ||||| | || || || || ||||| || ||||| || | || Sbjct 2842404 TCTGAAGAGGTTCAAGATCTGCTTCTGCTGGACGTGACTCCGCTGTCGCTGGGCATTGAG 2842463 Query 350399 ACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAG 350458 || |||| | || ||||| | | || || || | || |||| || || || Sbjct 2842464 ACGGCTGGCGGTGTCATGACCACTTTGATCAAGAGGAACACCACGATACCCACGAAGCAG 2842523 Query 350459 TCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAA 350518 | || || ||| | || | | | || |||||||| | ||| |||||||| | || Sbjct 2842524 ACGCAGACGTTTACCACGTATTCCGACAATCAGCCGGGAGTACTTATTCAAGTCTACGAG 2842583 Query 350519 GGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATT 350578 || || | || || || || || || | ||||| ||||| || | | ||| Sbjct 2842584 GGAGAGAGAGCGATGACCAAGGACAACAACATCCTTGGTAAATTTGAGCTGACGGGAATA 2842643 Query 350579 CCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGT 350638 ||||| |||||| || || || || |||||||| | ||||| || || | |||||| Sbjct 2842644 CCACCTGCGCCTAGGGGCGTACCGCAAATTGAAGTTACCTTCGACATCGACGCCAATGGT 2842703 Query 350639 A 350639 | Sbjct 2842704 A 2842704 >seq3008 Length=1134530 Score = 215 bits (238), Expect = 2e-50 Identities = 187/232 (81%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | || | ||| | ||| ||||| || ||||||||||| || ||||| Sbjct 387395 CATACCACCGCGAAGCCTCAAAACCAAATGCAGAGTGGATTCTTTTTGAATGTTGTAATC 387454 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| ||||||||||||||||||||||||||||| | ||| |||||||| || Sbjct 387455 GGAGAGCGTTCGACCATCTTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGATCCGG 387514 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| ||||||||||| || |||||||||||||| ||||| || || | ||| |||| || Sbjct 387515 AGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTGACATTCTCGATAGTATCTGATGCCTC 387574 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||| | || | || || || ||||| ||||| || |||||||||||| Sbjct 387575 AACTTCTAACGTGATGGTTTTCCCTGTTAGAGTTTTGACGAAAATCTGCATT 387626 Score = 203 bits (224), Expect = 1e-46 Identities = 184/232 (79%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | ||| ||||| | ||| | |||||| || || || || || ||||| Sbjct 388538 CATTCCACCACGCAGTCTGAGAACCAAATGCAAAGTAGATTCCTTCTGGATGTTGTAATC 388597 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||||||||| |||||||| ||||| || | ||| |||||||| || Sbjct 388598 GGACAAAGTGCGACCATCTTCAAGCTGTTTTCCGGCAAAAATCAAACGCTGCTGATCGGG 388657 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || |||||||| |||||||| ||||||||||| ||||| | |||||| | ||| Sbjct 388658 TGGAATACCCTCTTTATCTTGAATTTTGGCTTTTACATTCTCAATAGTATCAGAAGCTTC 388717 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||||||| || | || || || || | ||| || ||||| ||||||||| Sbjct 388718 AACTTCAAGAGTTATAGTTTTCCCAGTCAATGTCTTCACAAAGATCTGCATT 388769 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | |||| ||| ||||| | ||| || || ||||| ||||||||||| Sbjct 387623 CATTCCACCGCGAAGCCTTAAAACCAGATGCAAAGTGGATTCCTTTTGGATATTATAATC 387682 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || ||||| ||||| ||||| ||||||||||| || | ||| ||||||||||| Sbjct 387683 AGACAAAGTGCGCCCGTCTTCCAGTTGCTTTCCAGCAAAAATCAAACGCTGCTGATCAGG 387742 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || |||||||| ||||| || ||||||||||| ||||| | |||||| | || Sbjct 387743 TGGGATACCCTCTTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTATCAGAAGACTC 387802 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | || || ||||| || ||||| || ||||||||||| Sbjct 387803 GACTTCCAGCGTGATGGTTTTACCGGTAAGAGTTTTAACGAAAATCTGCAT 387853 Score = 199 bits (220), Expect = 1e-45 Identities = 185/235 (79%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| || || | | || ||| | ||| |||||||| ||||| |||||||| | Sbjct 388078 TTTGCATACCTCCGCGAAGCCGTAAAACTAAATGCAGAGTAGATTCTTTCTGAATATTGT 388137 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | ||| || || |||||||| |||||||| |||||||| | ||| ||||||| Sbjct 388138 AATCGGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAACGCTGCTGAT 388197 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || ||||| || |||||||| || || || || ||||| | ||| |||| Sbjct 388198 CCGGAGGGATGCCCTCTTTGTCTTGAATTTTTGCCTTAACGTTCTCAATTGTATCTGATG 388257 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| | |||| |||||||| ||||| ||||| || ||||||||||| Sbjct 388258 CTTCGACTTCTAACGTAATGGTCTTTCCTGTTAGAGTTTTGACGAAAATCTGCAT 388312 Score = 194 bits (214), Expect = 5e-44 Identities = 182/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | ||| ||||| | ||| | |||||| || || || ||||| ||||| Sbjct 388310 CATACCACCGCGCAGTCTGAGAACCAAATGCAAAGTAGATTCCTTCTGGATATTGTAATC 388369 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||||||||||||||| || | | |||||||| || Sbjct 388370 AGACAAAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGCTGATCCGG 388429 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || |||||||| || |||||||| || || ||||| || || | || |||| ||| Sbjct 388430 AGGGATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTCTCGATTGTGTCTGATGCTTC 388489 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 |||||| | || | |||||||| || | ||||| || |||||||||||| Sbjct 388490 AACTTCCAACGTTATGGTCTTTCCTGTCAAGGTTTTAACGAAAATCTGCATT 388541 Score = 185 bits (204), Expect = 3e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||||||||| ||||| || ||||||||||| || || ||||| || || ||||| Sbjct 387186 AGCACAAGATGAAGTGTAGATTCCTTTTGAATATTGTAGTCTGATAAAGTGCGTCCATCC 387245 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| || || ||||| || || | ||| |||||||||||||| || |||||||| Sbjct 387246 TCGAGTTGCTTGCCTGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCCTCTTTATCT 387305 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || || || ||||| | |||||| | || ||||| | ||||| ||| Sbjct 387306 TGAATCTTTGCCTTCACGTTCTCAATGGTATCAGAAGCCTCGACTTCCAATGTAATCGTC 387365 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| |||| ||||| || ||||||||||| Sbjct 387366 TTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 387397 Score = 181 bits (200), Expect = 3e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | || | ||| | ||||||||| || |||||||||||||| ||||| || Sbjct 387857 ACCACCGCGAAGCCTCAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTGTAATCTGA 387916 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | ||||| |||||||| ||||||||||| |||||||| | ||| || ||||| ||||| Sbjct 387917 GAGCGTTCGACCATCTTCGAGTTGTTTTCCGGCAAAGATCAAACGCTGTTGATCCGGAGG 387976 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||||| || ||||||||||| || || || || || || | || |||| || || Sbjct 387977 GATTCCTTCCTTGTCCTGAATTTTTGCCTTGACGTTCTCGATTGTGTCTGATGCCTCGAC 388036 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| | || | || ||||| || || ||||| |||||||| ||||| Sbjct 388037 TTCTAAAGTGATGGTTTTTCCTGTAAGAGTTTTCACAAAAATTTGCAT 388084 >seq2987 Length=818656 Score = 181 bits (200), Expect = 3e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || ||||| || || || |||||||| ||||| || || | |||| |||||| Sbjct 733553 AGTACCAGGTGAAGTGTGGATTCCTTTTGAATGTTATAGTCTGAAAGAGTTCTGCCATCT 733494 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || |||||||| || || || || ||||| ||||||||||||||||| |||||||| ||| Sbjct 733493 TCCAGTTGTTTGCCGGCGAAAATCAGACGCTGCTGATCAGGAGGAATACCTTCTTTGTCC 733434 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| ||||||||||| || |||| ||||| | ||| ||||| || || | ||| Sbjct 733433 TGGATTTTGGCTTTTACATTTTCGATCGTGTCAGAAGCTTCGACTTCGAGCGTGATGGTC 733374 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || |||||||| || |||||| Sbjct 733373 TTGCCCGTAAGAGTCTTTACAAAGATTTGCATT 733341 Score = 176 bits (194), Expect = 1e-38 Identities = 165/209 (79%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || |||||||| ||||| || || | |||| |||||||| | Sbjct 733776 CAAG-TGGAGCGTGGATTCCTTTTGAATGTTATAGTCCGAAAGAGTTCTGCCATCTTCCA 733718 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 ||||||| || || || || ||||||||||||||||||||||| |||||||| ||||| | Sbjct 733717 GTTGTTTGCCGGCGAAAATCAGACGTTGCTGATCAGGAGGAATACCTTCTTTGTCCTGGA 733658 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| |||||||| || || |||| || || | ||| ||||| ||||| | || || | Sbjct 733657 TTTTGGCTTTTACGTTTTCGATCGTGTCGGAAGCTTCGACTTCGAGTGTGATGGTTTTGC 733598 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || |||||||| || || ||||||||| Sbjct 733597 CTGTGAGTGTTTTCACGAAGATCTGCATT 733569 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 140528 AACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTC 140587 ||| | ||| || || || || ||||| || |||||||| || | |||| || ||||| Sbjct 733323 AACCAAATGGAGTGTGGATTCCTTTTGGATGTTATAATCTGAAAGAGTTCTGCCGTCTTC 733264 Query 140588 AAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 | |||||| ||||| ||||| ||||| ||||||||||||||||| || |||||||| || Sbjct 733263 CAATTGTTTACCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCCTCTTTATCTTG 733204 Query 140648 AATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTT 140707 || || ||||| ||||| || || | ||||| | ||| || ||||| || | || || Sbjct 733203 GATCTTGGCTTTGACATTTTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATAGTTTT 733144 Query 140708 TCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || || ||||| || ||||| Sbjct 733143 TCCAGTGAGGGTCTTCACAAAGATTTGCAT 733114 >seq2856 Length=4748033 Score = 172 bits (190), Expect = 2e-37 Identities = 152/190 (80%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||| ||||||||||| || | || || |||||||| || || || ||||| |||| Sbjct 1621063 CTTTTTGGATATTATAATCTGAAAGAGTACGTCCATCTTCCAGCTGCTTGCCAGCGAAGA 1621004 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTAT 140667 | || || ||||||||||| |||||||| ||||||||||| || || ||||||||||| | Sbjct 1621003 TAAGTCGCTGCTGATCAGGTGGAATTCCCTCTTTATCCTGTATCTTGGCTTTTACATTTT 1620944 Query 140668 CAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 | || | ||| || | ||| || || || |||| ||||| || || || |||||||| | Sbjct 1620943 CTATAGTATCCGACGATTCTACCTCGAGGGTAATAGTCTTACCCGTGAGGGTTTTTACGA 1620884 Query 140728 AAATCTGCAT 140737 |||||||||| Sbjct 1620883 AAATCTGCAT 1620874 >seq2783 Length=2925630 Score = 104 bits (114), Expect = 7e-17 Identities = 122/164 (74%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 130659 GACATACCATAGAACACTTTATAATTTTCACCATTTTCTTCAACAACTTCCCCAGCACAT 130718 ||||| ||||| || | ||| || || | ||||||| || | |||||| || |||| Sbjct 2360545 GACATTCCATAAAAAAGTTTGTATTTCTTCCCATTTTTCTCTATAACTTCGCCTCCACAC 2360604 Query 130719 TCATCATGTGCAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCT 130778 || || || | || |||||||| || ||||||||| || || || || ||||||||| Sbjct 2360605 TCGTCGTGGCCCGCGAACATTCCACCTGCCATAACAAAGTCCGCACCGGCACCAAATGCT 2360664 Query 130779 TTCGCAATATCCCCGGGAGATTTACAACCCCCAT-CAGCAATAA 130821 ||||| | ||| |||||| | |||| || |||| | ||||||| Sbjct 2360665 TTCGCCAAATCTCCGGGACAAGTACAGCCGCCATCCTGCAATAA 2360708 >seq2953 Length=635362 Score = 100 bits (110), Expect = 9e-16 Identities = 136/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 |||||||| |||| || | || || ||| | |||| | |||| ||||||||| Sbjct 617335 AAAATGAAAGAAACAGCAGCGGCTTACTTAAATACTTCAGTGAAAAATGCGGTTATTACT 617394 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT-GGCAGCATTGC 349680 |||||||| |||||||| ||| | || || || |||||||||||| ||||| ||| | Sbjct 617395 GTACCAGCGTATTTTAACGATTCTCAACGACAAGCCACAAAAGATGCTGGGCAG-ATTTC 617453 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || || || || || || | ||||| ||||| || || || ||| ||||||| || | Sbjct 617454 TGGATTGAACGTGCTTCGAGTAATTAACGAACCAACCGCAGCTGCACTTGCATACGGCAT 617513 Query 349741 TGATAAA 349747 |||||| Sbjct 617514 GGATAAA 617520 >seq2963 Length=1349199 Score = 96.9 bits (106), Expect = 1e-14 Identities = 128/171 (75%), Gaps = 9/171 (5%) Strand=Plus/Minus Query 377421 TTTTGGATTTTCAGATAATGATAAT-ATTTCTT-CAATGCGTGGCACACCACGTGTAACA 377478 ||| || |||| | |||| |||| ||||||| |||| || |||||||| | || || Sbjct 1232953 TTTCGGTTTTTTAC-TAATATTAATGATTTCTTTCAAT-CGAGGCACACCGAGAGTTACG 1232896 Query 377479 TTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGC 377538 ||| || |||| ||||| |||||||||||||| || || || | ||||| | |||| Sbjct 1232895 TTC---TTCGATGACACACCGGCAAAGTGGAAAGTGTTCAGTGTCATCTGAGTGGCGGGC 1232839 Query 377539 TCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCTCCAGGATTGACA 377589 || || | ||||||||||| | | |||| |||||||| || || ||||| Sbjct 1232838 TCGCCGAGAGACTGCGCTGCCAAAGCGCCGACCATTTCACCGGG--TGACA 1232790 >seq2981 Length=868677 Score = 95.1 bits (104), Expect = 4e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 390772 ATATATGGGATGGAAACGGTTCAAGAGATTTTTTAGATAGTAGAGGCTTAACTAATTTAG 390831 |||| ||||||||||| |||||| | | ||||||||| | | ||||| ||| || || Sbjct 860494 ATATCTGGGATGGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTGATAGAG 860435 Query 390832 AAGAAGATGATTTAGGGCCAGTATATGGACATCAATGGAGACATTTT 390878 | |||| ||||||||| || || |||||| |||||||||||| ||| Sbjct 860434 AGGAAGGTGATTTAGGACCTGTTTATGGATTTCAATGGAGACACTTT 860388 >seq2838 Length=268038 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 ||||| || ||||| ||||||||||| || || || | |||||||| | |||||| ||| Sbjct 122064 GTAGATTCCTTTTGTATATTATAATCGGACAAAGTCCTACCATCTTCTAATTGTTTGCCA 122005 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCT 140636 |||||||| | || |||||||| || ||||||||| Sbjct 122004 GCAAAGATCAATCGCTGCTGATCTGGTGGAATTCCT 121969 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||||||||| |||||||| || || ||||| || |||| |||||| | ||||| || Sbjct 121613 CCTTCTTTATCTTGAATTTTTGCCTTCACATTTTCGATCGTATCAGACGCCTCAACCTCG 121554 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || || || || || ||||| ||||| |||||||| Sbjct 121553 AGGGTGATGGTTTTCCCCGTAAGAGTTTTCACAAAGATCTGCAT 121510 >seq2851 Length=1908893 Score = 84.2 bits (92), Expect = 7e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943 ||| | ||||| |||| ||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 41446 ATAGAAGGGGACGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACCGGGA 41505 Query 235944 TCAAAACCCAGCATCTCCA 235962 || | ||| || |||||| Sbjct 41506 TCGATGCCCGGCGTCTCCA 41524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515195574983090