Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq2981 100 2e-16
>seq2981
Length=868677
Score = 100 bits (110), Expect = 2e-16
Identities = 185/266 (70%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 112027 ATCCCTTTACCAGTATAATCCGCCTG-ACATCCAGTGTATGTTGCCCCATAGTGTCTCCA 112085
|| |||| | ||||||||| | || | |||| | || | || ||| ||||||||||
Sbjct 860341 ATACCTTGTCTAGTATAATCTGTGTGCATATCCTGA-TACTTGGCACCAAAGTGTCTCCA 860399
Query 112086 TTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTGGAAATTGCTCTCTATT 112145
||| |||||||||| ||| || | ||| || || |||| | || | | | |
Sbjct 860400 TTGAAATCCATAAACAGGTCCTAAATCACCTTCCTCTCTATCAGTGAAGC-CACAAGAGT 860458
Query 112146 C-AACAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTC 112204
| || ||| | | | | || || ||| || | || |||||| || ||| |||
Sbjct 860459 CTAAAAAAGCCCGTGAACCATTTCCATCCCAGATATGAACACCTTTATCTGCTAATTCTT 860518
Query 112205 TTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACA 112264
| | |||||| ||||||||||||||||||| |||||||| || || || |||| |||
Sbjct 860519 TGGAATTTGTCGATCCTCTAATAAACCATAATAATTCTTCAACTACTGCTCGCCAGAACA 860578
Query 112265 CTCTTTTAGTAGTTAGCAGTGGAAAA 112290
|||||||||| || || | ||| |||
Sbjct 860579 CTCTTTTAGTGGTCAGTAATGGGAAA 860604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391931126183890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |