Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2581 147 2e-30 >seq2581 Length=3237177 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 ||||| ||| ||||| || || ||||| ||||||||| ||||| ||||||||||| Sbjct 740667 GGGTCAGAAATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATG 740608 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 || || || || || ||||| || | ||||||| | || ||||| | || |||||| Sbjct 740607 GCGATTTGGAAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACTGAATCTT 740548 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || | ||||||||| || || || || ||| || ||||| ||||||||||||||||| Sbjct 740547 TCAATTAAGTTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAG 740488 Query 4989 ATAAAGTACTGTTCGTCAGGCTTAAGTTTTT 5019 |||||||| ||||||| || || |||| Sbjct 740487 ATAAAGTATCTCTCGTCAGAATTGAGCTTTT 740457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427033829858990