Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2581 122 9e-23 >seq2581 Length=3237177 Score = 122 bits (134), Expect = 9e-23 Identities = 161/221 (73%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || || || ||||| |||| ||||||||| |||||||||||||| || || || || Sbjct 740658 ATGTAAGTTTCAATGAGTAGTGAATACATTTCTGAATGAATATTTTCTATGGCGATTTGG 740599 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || ||||||||||| | ||||| | | || || || | | ||||||| | ||| Sbjct 740598 AAACCATAAAAACAGCGTGCTTCTGCGATTTTTACTTCTTGACTGAATCTTTCAATTAAG 740539 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| |||||||| |||||| |||||||||||| || | ||||| ||||| | | Sbjct 740538 TTTTCATTAACAATTCCATCAGAAGCAGCAAAGAACGCCAAAACATGAGAGATAAAGTAT 740479 Query 23959 CTTTCATCAG--TTGATAATTT-TTTCCAATCATTAATATC 23996 || || |||| |||| ||| || |||||| || |||| Sbjct 740478 CTCTCGTCAGAATTGAGCTTTTCTTCCCAATCCTTCTTATC 740438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468248642000