Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2981 102 1e-16 >seq2981 Length=868677 Score = 102 bits (112), Expect = 1e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 50301 TTCCCTCTATTTACGACTaaaaaaaTGTTTTGGCGCGGAATAGCGGAAGAACTTTTATGG 50360 ||||| || | || ||||||| | |||| ||||| | | ||| |||||| | |||||| Sbjct 860603 TTCCCATTACTGACCACTAAAAGAGTGTTCTGGCGAGCAGTAGTTGAAGAATTATTATGG 860544 Query 50361 TTCCTCGACGGATCTACAAATTCTTTAAAGTTATCGGAGAAGTCCGTTCGTATATGGGAC 50420 || | ||||| |||||||| | | ||| | || || |||| ||| ||||| Sbjct 860543 TTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAGGTGTTCATATCTGGGAT 860484 Query 50421 GCTCACGGTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGAT 50480 | | ||||| | | |||||| || || || | | | ||| | |||| ||| Sbjct 860483 GGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTGATAGAGAGGAAGGTGAT 860424 Query 50481 TTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC 50521 |||||||||||||| || |||||||||||||| ||||| || Sbjct 860423 TTAGGACCTGTTTATGGATTTCAATGGAGACACTTTGGTGC 860383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667049934526800