Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq2981 102 1e-16
>seq2981
Length=868677
Score = 102 bits (112), Expect = 1e-16
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 50301 TTCCCTCTATTTACGACTaaaaaaaTGTTTTGGCGCGGAATAGCGGAAGAACTTTTATGG 50360
||||| || | || ||||||| | |||| ||||| | | ||| |||||| | ||||||
Sbjct 860603 TTCCCATTACTGACCACTAAAAGAGTGTTCTGGCGAGCAGTAGTTGAAGAATTATTATGG 860544
Query 50361 TTCCTCGACGGATCTACAAATTCTTTAAAGTTATCGGAGAAGTCCGTTCGTATATGGGAC 50420
|| | ||||| |||||||| | | ||| | || || |||| ||| |||||
Sbjct 860543 TTTATTAGAGGATCGACAAATTCCAAAGAATTAGCAGATAAAGGTGTTCATATCTGGGAT 860484
Query 50421 GCTCACGGTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGAT 50480
| | ||||| | | |||||| || || || | | | ||| | |||| |||
Sbjct 860483 GGAAATGGTTCACGGGCTTTTTTAGACTCTTGTGGCTTCACTGATAGAGAGGAAGGTGAT 860424
Query 50481 TTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGC 50521
|||||||||||||| || |||||||||||||| ||||| ||
Sbjct 860423 TTAGGACCTGTTTATGGATTTCAATGGAGACACTTTGGTGC 860383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667049934526800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |