Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_000902.1
Length=60942
Score E
Sequences producing significant alignments: (Bits) Value
seq2410 93.3 2e-14
seq1262 93.3 2e-14
>seq2410
Length=3205
Score = 93.3 bits (102), Expect = 2e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 20612 GCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 20670
|||| |||||||||| ||| ||||| | ||||||||||||| ||||||||||||||| |
Sbjct 951 GCCCCTTAGCTCAGTTGGTTAGAGCAAACGACTCATAATCGTTAGGTCGCTGGTTCAAGT 1010
Query 20671 CCAGCAAGGGCCACCA 20686
|||||| |||||||||
Sbjct 1011 CCAGCAGGGGCCACCA 1026
Score = 82.4 bits (90), Expect = 3e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 20613 CCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATC 20671
||| |||||||||| ||| ||||| ||||||||||||| |||||||||||||||| ||
Sbjct 2304 CCCCTTAGCTCAGTTGGTTAGAGCATACGACTCATAATCGTCAGGTCGCTGGTTCAAGTC 2363
Query 20672 CAGCAAGGGCCACCA 20686
||||| | | |||||
Sbjct 2364 CAGCAGGAGGCACCA 2378
>seq1262
Length=72559
Score = 93.3 bits (102), Expect = 2e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 20610 CGGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAA 20668
|||||| |||||||||| ||| ||||| ||||||||||||| |||||||||||||||
Sbjct 63895 CGGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTGGTTCAA 63836
Query 20669 ATCCAGCAAGGGCCACCA 20686
||||||| |||||||||
Sbjct 63835 GTCCAGCAGGGGCCACCA 63818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194820941684752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |