Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4853 87.8 4e-12
>seq4853
Length=2014
Score = 87.8 bits (96), Expect = 4e-12
Identities = 115/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|||||||| ||||||||| |||||| | |||||||| ||||| |||| ||||| ||
Sbjct 955 TTCGCCATCTATTTGGAACCCTGGCACTCGGATATATTTGAGTTTTTGGATTTGAAGAAA 896
Query 249337 AACAACGGCAACGA-GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGA 249395
|| | ||||| || | || | || || || | ||||| | |||||| | ||||
Sbjct 895 AATACTGGCAAGGAAGAGTATC-GTGCACGAGATTTATTCTATGCTCTGTGGATACCCGA 837
Query 249396 CTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGG 249432
|||||||||| || || |||| || |||||||||
Sbjct 836 CTTGTTCATGAAACGTGTGGAGGCAGATGGCGATTGG 800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073339239284032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |