Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4853 87.8 4e-12 >seq4853 Length=2014 Score = 87.8 bits (96), Expect = 4e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 |||||||| ||||||||| |||||| | |||||||| ||||| |||| ||||| || Sbjct 955 TTCGCCATCTATTTGGAACCCTGGCACTCGGATATATTTGAGTTTTTGGATTTGAAGAAA 896 Query 249337 AACAACGGCAACGA-GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGA 249395 || | ||||| || | || | || || || | ||||| | |||||| | |||| Sbjct 895 AATACTGGCAAGGAAGAGTATC-GTGCACGAGATTTATTCTATGCTCTGTGGATACCCGA 837 Query 249396 CTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGG 249432 |||||||||| || || |||| || ||||||||| Sbjct 836 CTTGTTCATGAAACGTGTGGAGGCAGATGGCGATTGG 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073339239284032