Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2021 98.7 2e-15 >seq2021 Length=2943 Score = 98.7 bits (108), Expect = 2e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630 |||||||| |||||| || || | |||| ||| |||| || || || || ||||| Sbjct 1804 TTCACCACCTGGAATTCACCAGACAATACACGACGTGTATAGATATTAGAAGTATAAGGC 1745 Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690 ||||| |||||| ||||||| ||| ||||||||||| || |||||||| || |||| | Sbjct 1744 TCAAAAGATTCATTATTGCCCATGATTTGTGCAGTGGAGGCCGTAGGCATTGGTGCAATA 1685 Query 93691 AACATTGAATTGTGAACACCAT 93712 | || ||||| | || |||| Sbjct 1684 AGCAAAGAATTACGCACGCCAT 1663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989190328331795