Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2021 98.7 2e-15
>seq2021
Length=2943
Score = 98.7 bits (108), Expect = 2e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630
|||||||| |||||| || || | |||| ||| |||| || || || || |||||
Sbjct 1804 TTCACCACCTGGAATTCACCAGACAATACACGACGTGTATAGATATTAGAAGTATAAGGC 1745
Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690
||||| |||||| ||||||| ||| ||||||||||| || |||||||| || |||| |
Sbjct 1744 TCAAAAGATTCATTATTGCCCATGATTTGTGCAGTGGAGGCCGTAGGCATTGGTGCAATA 1685
Query 93691 AACATTGAATTGTGAACACCAT 93712
| || ||||| | || ||||
Sbjct 1684 AGCAAAGAATTACGCACGCCAT 1663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989190328331795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |