Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq12187 91.5 1e-13
>seq12187
Length=3570
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATT--CTGGC 22807
|| ||||| |||||||| || | | | ||| | | || || || | |||| |||||
Sbjct 1409 GCATTTGCAGCTGTTGAGGGTAT--TTTCTTCAGTGGCAGTTTCGCCTCTATTTTCTGGC 1466
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
| ||||||||| |||||||| || || | || ||||| ||| ||||| |||||||
Sbjct 1467 TTAAGAAACGTGGTCTCATGCCTGGCCTGACATTCTCCAATGAGCTGATTTCACGTGACG 1526
Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927
|||| | || ||||||||||| ||| || |||| | || ||| | ||||| |||
Sbjct 1527 AAGGCTTGCATTGTGACTTTGCCTGTTTGATGTTCAAACATTTGGTGCAGAAACCTAGTC 1586
Query 22928 AGGA-CG-ATGCACATCAAATCATATCTGATGCCGT 22961
|| || || || | ||||||||| ||| || ||
Sbjct 1587 GTGAGCGCAT--ACTTGAAATCATATGTGAGGCTGT 1620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356098797754747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |