Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq12187 91.5 1e-13 >seq12187 Length=3570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATT--CTGGC 22807 || ||||| |||||||| || | | | ||| | | || || || | |||| ||||| Sbjct 1409 GCATTTGCAGCTGTTGAGGGTAT--TTTCTTCAGTGGCAGTTTCGCCTCTATTTTCTGGC 1466 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | ||||||||| |||||||| || || | || ||||| ||| ||||| ||||||| Sbjct 1467 TTAAGAAACGTGGTCTCATGCCTGGCCTGACATTCTCCAATGAGCTGATTTCACGTGACG 1526 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| | || ||||||||||| ||| || |||| | || ||| | ||||| ||| Sbjct 1527 AAGGCTTGCATTGTGACTTTGCCTGTTTGATGTTCAAACATTTGGTGCAGAAACCTAGTC 1586 Query 22928 AGGA-CG-ATGCACATCAAATCATATCTGATGCCGT 22961 || || || || | ||||||||| ||| || || Sbjct 1587 GTGAGCGCAT--ACTTGAAATCATATGTGAGGCTGT 1620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356098797754747