Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2021 408 6e-109 seq4853 379 3e-100 seq12187 284 2e-71 >seq2021 Length=2943 Score = 408 bits (452), Expect = 6e-109 Identities = 971/1464 (66%), Gaps = 33/1464 (2%) Strand=Plus/Minus Query 78712 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 78771 |||| || ||||| || | | || || || ||||| || | ||| ||||| || || Sbjct 2149 TCCACAGTAAATTGTATAGCATTGGCAGCTGGCTTCGTGCGCAAATAATACATACCGGTC 2090 Query 78772 TTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 78831 || | || |||| ||||||||||| || || ||||| |||| |||| || Sbjct 2089 TTCAAGCCTGCTTTCCAACCGTAGAAATGTATGGATGTCAGTTTACCATAATTCGGCTCA 2030 Query 78832 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 78891 || | ||| || || | |||||||||||||| || || || || | || || |||||| Sbjct 2029 GCCACATGTATGTTAAACGATTGACTTTGATCTATAAAAGCACCACGATCAGCTGCCATT 1970 Query 78892 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 78950 || || |||||| | ||| ||||||| || || || || || | | || | Sbjct 1969 TTAATAGACGTCTTAACAGAAATCTCCCAAACTGTCTTGTACAAGTCACGCACATGCTGC 1910 Query 78951 TGGAA--GGTTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCT 79008 | | | | |||| || |||||||||| || | ||||| ||| || || || Sbjct 1909 GGTATACGCTCAATATTTTGTATGGATCCACGTTCAGATATAATATCATTTTTCATATCA 1850 Query 79009 TCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAAT 79068 |||| ||||| | |||||| ||| | | || | ||| |||| || || || ||| Sbjct 1849 TCATCCCATAGATCAAGCTCGGTCAAATCACGTAGCAAATGATGATTCACCACCTGGAAT 1790 Query 79069 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTA 79128 || ||||||||||| | || || || |||||| ||||| || || | ||||||||| Sbjct 1789 TCACCAGACAATACACGACGTGTATAGATATTAGAAGTATAAGGCTCAAAAGATTCATTA 1730 Query 79129 TTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTA 79188 || |||| ||||| ||||| || ||||| ||||| ||||| | | ||| ||| | Sbjct 1729 TTGCCCATGATTTGTGCAGTGGAGGCCGTAGGCATTGGTGCAATAAGCAAAGAATTACGC 1670 Query 79189 AGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGA 79246 | || ||| | | ||||| || || || |||||| ||| ||||||| || Sbjct 1669 ACGCC--ATGTTTAGCAATTTTCTCCTTCAGCTCCGCCCAATTCCATAGATCAGTAGGTG 1612 Query 79247 CAACATTCCAAAGATCATATTGTAGAATACCGTTACT--------AGC--------GT-- 79288 | ||| | |||||| |||| ||| || || || ||| || Sbjct 1611 TTTTTTGCCACATATCATACTGTAAAATTCCCTTGCTGACAGGCGAGCCCGCATAAGTTT 1552 Query 79289 -----ATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGC 79343 ||| || | || |||||||| || || ||| || || || ||||| || || Sbjct 1551 CATAANTGAGCCCGCATAAGTTTCATAGGGACCCAGCTTCTCAGCCAACTCACAGCTGGC 1492 Query 79344 CTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 79403 || || || || |||||||| ||||| || || | | ||| || | |||||| Sbjct 1491 TTCCAAGGCACCATAATAAATCGTTTCAAATATTTGTTGATTTAGCTTAAATGCTTCCTC 1432 Query 79404 GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463 || ||| |||||||| | ||| || || || ||||| |||||||| || |||||||| Sbjct 1431 ACTTTCATATGGATAACGCATGAGTATTAATGCATCTGCGAATCCTTGTACGCCAATACC 1372 Query 79464 GATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATC 79523 || || | ||| | | |||| ||| | || || || | || || ||||| || || Sbjct 1371 TATGGGACGATGACGCATATTTGAACGCTTGGCCTCCGGCAGCGGGTAGTAATTGATGTC 1312 Query 79524 TATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC 79583 ||| ||||| || | ||| | || | ||| | || || || ||||| |||||| Sbjct 1311 TATGATTTTGTTCAAATTACGTGTTACAATTTTAGCAACTTCTTTGAGTTTTTTAAAATC 1252 Query 79584 AAA--TCGTCCATCTATT-ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGC 79640 | | || | | || |||||||| || | || | || || | ||||||||| || Sbjct 1251 ATAAGTCTTGTCTGGGTTGACAAACATATTGAGTGCAATTGAGGCTAAATTACAAACAGC 1192 Query 79641 TACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGT 79700 | |||| | ||| ||||| || ||||||||||| | || || ||||| || || Sbjct 1191 AATTTCATCCGGTGCCGAATATTCTACAATTTCAGTGCATAAATTGCTGCACTTGATAGT 1132 Query 79701 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGT 79760 |||| ||| |||||||||||||| ||||| ||||||||||| || || | ||||| Sbjct 1131 GCCTAGATTCTGTTGATTACTCTTGCGATTACAAGCATCCTTATAGAGCATATATGGAGT 1072 Query 79761 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 79820 |||||||| | ||||| |||||||| || ||| | | | |||| || | | Sbjct 1071 GCCAGTTTCCACCTGAGCCTCTATAATGGCAAACCACAAGGTTTGAGCTTTAACAGTGCG 1012 Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880 ||| | ||| | || |||| ||| | | | ||||| || || |||||||| Sbjct 1011 ATTGGCACGACCTTCACGCTCATATTTCTCATAAAGTTGCTCGAATTCTTCACCCCAAAC 952 Query 79881 ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTAC 79940 || | || ||| || || | || || ||||| | ||||| || ||||| ||| || Sbjct 951 TTCATGTAGTCCGGGGCACTTGTGTGGGCACATGAGTGACCAATCGCCATCTGCCTCCAC 892 Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 |||||||| || | || || ||||| ||||| ||||| ||||| | | || ||| Sbjct 891 ACGTTTCATGAATAAGTCGGGTATCCATAGAGCATAAAATAAATCTCGTGCACGATACTC 832 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 || || || ||||| || || | ||| | ||| | | ||||| || ||||| ||||| Sbjct 831 TTCCTTGCCAGTATTTTTCTTCAAATCCAAAAACTCAAATATATCCGAGTGCCAGGGTTC 772 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 || || ||||| | | || || |||||| ||||||||||| | ||| | || Sbjct 771 TAAATAGATGGCGAAGGCGCCTGGACGTTTGCCGCCTCCCTGATCCACGTAGCGCGCCAC 712 Query 80121 GTTATTATAAACTCTCAACATTGG 80144 |||||| | || | || ||| || Sbjct 711 GTTATTGAACACACGCAGCATAGG 688 >seq4853 Length=2014 Score = 379 bits (420), Expect = 3e-100 Identities = 957/1446 (66%), Gaps = 13/1446 (1%) Strand=Plus/Plus Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 ||||||| |||| ||||| ||||| || || || ||||| ||||| | | ||| || Sbjct 1 CATTATTGCCCATGATTTGTGCAGTGGAGGCTGTAGGCATTGGTGCAATGAGCAAAGAAT 60 Query 79184 TTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241 | | | || ||| | | ||||| || || || |||||| ||| ||||||| Sbjct 61 TACGCACGCC--ATGTTTAGCAATTTTCTCCTTCAGCTCCGCCCAATTCCATAGATCAGT 118 Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTA 79301 || | ||| | |||||| |||| ||| || || || | ||| || | || Sbjct 119 AGGTGTTTTTTGCCACATATCATACTGTAAAATTCCCTTGCTGACAGGTGAGCCCGCATA 178 Query 79302 TGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATA 79361 |||||||| || || ||| || || || ||||| || || || || || || ||||| Sbjct 179 AGTTTCATAGGGACCCAGCTTCTCAGCCAACTCACAGCTGGCTTCCAAGGCACCATAATA 238 Query 79362 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATT 79421 ||| ||||| || || | | ||| || | |||||| || ||| |||||||| Sbjct 239 AATCGTTTCAAATATTTGTTGATTTAGCTTAAATGCTTCCTCACTTTCATATGGATAACG 298 Query 79422 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 79481 | ||| || || || ||||| |||||||| || |||||||| || || | ||| | | | Sbjct 299 CATGAGTATCAATGCATCTGCGAATCCTTGTACTCCAATACCTATGGGACGATGACGCAT 358 Query 79482 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 79541 ||| ||| | || || || | || || ||||| || ||||| ||||| || | ||| Sbjct 359 ATTTGAACGCTTGGCCTCCGGCAGCGGGTAGTAATTGATGTCTATGATTTTGTTCAAATT 418 Query 79542 CCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA--TCGTCCATCTATT 79599 | || | ||| | || || || ||||| ||||||| | || | | || Sbjct 419 ACGTGTTACAATTTTAGCAACTTCTTTGAGTTTTTTAAAATCATAAGTCTTGTCTGGGTT 478 Query 79600 -ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 79658 |||||||| || | || | || || | ||||||||| || | |||| | ||| Sbjct 479 GACAAACATATTGAGTGCAATTGAGGCTAAATTACAAACAGCAATTTCATCCGGTGCCGA 538 Query 79659 ATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 ||||| || ||||||||||| | || || ||||| || || |||| ||| |||||||| Sbjct 539 ATATTCTACAATTTCAGTGCATAAATTGCTGCACTTGATAGTGCCTAGATTCTGTTGATT 598 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 |||||| ||||| ||||||||||| || || | ||||| |||||||| | |||| Sbjct 599 ACTCTTGCGATTACAAGCATCCTTATAGAGCATATATGGAGTGCCAGTTTCCACTTGAGC 658 Query 79779 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCT 79838 |||||||| || ||| | | | |||| || | | ||| | ||| | Sbjct 659 CTCTATAATGGCAAACCACAAGGTTTGAGCTTTAACAGTGCGATTGGCACGACCTTCACG 718 Query 79839 TTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA 79898 || |||| ||| | | | ||||| || || |||||||| || | || ||| || || Sbjct 719 CTCATATTTCTCATAAAGTTGCTCGAATTCTTCACCCCAAACTTCATGTAGTCCGGGGCA 778 Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATC 79958 | || || ||||| | ||||| || ||||| ||| || |||||||| || | || Sbjct 779 CTTGTGTGGGCACATGAGTGACCAATCGCCATCTGCCTCCACACGTTTCATGAACAAGTC 838 Query 79959 AGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCT 80017 || ||||| ||||| ||| |||| ||||| | | || ||| || || || ||||| | Sbjct 839 GGGTATCCACAGAGC-ATAGAATAAATCTCGTGCACGATACTCTTCCTTGCCAGTATTTT 897 Query 80018 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 80077 | || | ||| | ||| | | ||||| || ||||| |||||||| || ||||| | Sbjct 898 TCTTCAAATCCAAAAACTCAAATATATCCGAGTGCCAGGGTTCCAAATAGATGGCGAAGG 957 Query 80078 CTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 80137 | || || |||||| ||||||||||| | ||| | || |||||| | || | || Sbjct 958 CACCTGGACGTTTGCCGCCTCCCTGATCCACGTAGCGCGCCACGTTATTGAACACACGCA 1017 Query 80138 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 80197 ||| || | | |||||| || || ||||| || || | || | || |||| | Sbjct 1018 GCATAGGCACTAAACCATTAGAGGTGCCATTCGTGCCAGCAATGCCCGTGCCTTTGGCGC 1077 Query 80198 GAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255 | || | | | ||| || || || || ||||| || ||||| | |||||| | Sbjct 1078 GTATGCAATGCACATT--CAGGCCAATGCCGCCTGCGGACTTGGAGATCATGGCGCATTG 1135 Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 | || | | | || ||||| ||| ||| ||| ||| | || || |||||| Sbjct 1136 CTCTACGGACTTGAAAATACCCTCGATGGAGTCAGCAACCATAGTGAGCAGGAAACAGGA 1195 Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 |||| ||| | || || || | ||| |||| || ||||| ||||| ||||| | Sbjct 1196 GGACAGTTGTGGGCGTCTTGTGGCTGCAGCGAATAGCGTGGGAGAGGCGTGAGTAAAATA 1255 Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435 || || |||| |||||| || || || || | || |||||| || || || Sbjct 1256 GCGCTCTGATAGTAAATTGTAGGTTTCTATGGCCGCATCGATATCCTCGCCGTGTATGCC 1315 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 || || |||||||| | | || ||||| | || || || | ||| |||||||| Sbjct 1316 CACAGCCACACGCATCAGTAGATGTTGAGGACGCTCGACAATTTCCCCATTGATTTTCAA 1375 Query 80496 CAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 80555 || || || ||| | || || || || || || || || |||||| || || || Sbjct 1376 TAAATAGGAACGTTCGAGTGTCTTGAATCCGAAGTAATTATAGCCAAAGTCGCGATCATA 1435 Query 80556 AATAAT 80561 |||||| Sbjct 1436 AATAAT 1441 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 80682 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGC 80741 |||| |||||| ||||| ||||||| ||| || || || ||||| || || ||||| || Sbjct 1716 AAATGCTTTTTTCGTTTCTTTGTGTAAATTGGAGACTGCAATTCTAGCTGCCAAAATTGC 1775 Query 80742 ATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 80801 ||| || | ||| ||||| || ||||| || |||| || |||| | |||||||||| Sbjct 1776 ATAGTCCGCATGATGTGTGGTCATCGTGGCAGCAGTTTCAGCAGCCAAATTGTCCAATTC 1835 Query 80802 TACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 80840 | ||| | |||||| ||| | || | ||||| || Sbjct 1836 TCTGGTTTTAACTCCAGAATACAAGCCATTTATAACTTT 1874 >seq12187 Length=3570 Score = 284 bits (314), Expect = 2e-71 Identities = 489/704 (69%), Gaps = 7/704 (1%) Strand=Plus/Minus Query 49794 ATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 49853 ||| || ||||| ||||||||| ||| | || |||||||| || || || || || Sbjct 1717 ATCAGCCACAAACTCTATATATTCAGACATAAGTTTGCAATTCATGCCAATCAGATTCAC 1658 Query 49854 TGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCT 49913 || || || |||| ||||| |||||||| || ||| || || ||| || || Sbjct 1657 AGGCAGCGCATCAGTGAGAAACTCTTGTTCTATTTTTACAGCCTCACATATGATT--TCA 1600 Query 49914 A--ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 49971 | | | || ||| ||| |||| |||||||| ||||||||||| || || || Sbjct 1599 AGTATGCGCTCACGACTAGGTTTCTGCACCAAATGTTTGAACATCAAACAGGCAAAGTCA 1540 Query 49972 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 50031 || |||| || ||||| | ||| || || ||||| || || || || ||||| || Sbjct 1539 CAATGCAAGCCTTCGTCACGTGAAATCAGCTCATTGGAGAATGTCAGGCCAGGCATGAGA 1480 Query 50032 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACT 50091 ||||| || |||||||| || || || || || ||| ||||| || || || || Sbjct 1479 CCACGTTTCTTAAGCCAGAAAATAGAGGCGAAACTGCCACTGAAGAAAATACCCTCAACA 1420 Query 50092 GCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTC-ATGT-ATCCACTTTTGA 50148 || ||||| || | || | ||| ||| || |||| | | || ||| ||||| Sbjct 1419 GCTGCAAATGCTATAATACGCTCACCAAAATTGGCCGATTTCGATGAGATCCAGGCCATG 1360 Query 50149 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 50208 |||||||| |||||||| || ||| ||||| |||||| ||||| ||||| ||| | | Sbjct 1359 GCCCAATCAGCCTTCTTCTTAACAGCAGGCAGCGTTTCAATGGCGTTAAATAGAAAATCA 1300 Query 50209 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268 || || | || | || || || ||||||| || |||||||| || || | Sbjct 1299 CGTTGTTTTGTGTCACGTATGTAGGTGTCAATCAAAATGCTGTACATTTCAGAGTGCACA 1240 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328 ||||| ||||| || || || || || ||||| | ||||| || || || |||||| Sbjct 1239 TTTTCCATGGCAATTTGGAAACCATAAAAACAACGCGCCTCAGTTATTTGTACTTCTTGG 1180 Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388 | || || || | ||||||||||| || || || ||| ||| || ||||| ||||| Sbjct 1179 CTGAAACGCTCTACCAAATTTTCATTGACAATGCCATCAGAGGCGGCGAAAAATGCCAAA 1120 Query 50389 ACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTA 50448 ||||| ||||||||| | || || ||| | ||| | ||| ||||| ||||| || Sbjct 1119 ACATGCGATATAAAATGCCTCTCATTATCTGTCAATTTTTCCCAGTCATTCATATCCTTG 1060 Query 50449 GATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 ||| ||| ||||| ||||||||||||||||| || || ||||| Sbjct 1059 CATAAATCCACTTCCTCCACTGTCCAAAATGAAGCTTCGGCCTT 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717990030900360