Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 84.2 2e-11
>seq2789
Length=15484
Score = 84.2 bits (92), Expect = 2e-11
Identities = 173/255 (68%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 35963 TTAACATACGGTGCTAACACCTGATCGATGTTTGCAATTGTGGTCCCGCCATATTGATGA 36022
|| ||||| || ||||| | |||||| || ||| || || || ||||| ||||
Sbjct 3516 TTTACATAAGGGGCTAAAATAATATCGATATTGTTAATCGTTGTTCCACCATAAGTATGA 3575
Query 36023 CTTGCCACCTGTGCGATAATTTGAGCGGTTACAGCACATGCAACACCGATCGATTTAGGA 36082
||||| || || || || |||||||| |||| ||| ||| || || || |||
Sbjct 3576 CTTGCGACTTGCGCTATTATTTGAGCAGTTATAGCCGTTGCTGTTCCAATTGAACGTGGA 3635
Query 36083 CTTTCGATTTGTGCGCTACCCAATTTAAAACCATTCTCTAACATGTCTTTGAGATTAACA 36142
|||| |||| || | || | |||||| ||| || | ||| |||| | || |||
Sbjct 3636 GTTTCAATTTCAGCATTTCCTATTTTAAAGCCACCTTCAAGCATTCCTTTTAAATCAACT 3695
Query 36143 AGACAG-CAGTTAGTAAACGGCATAGCGGGTGCATAATCCATATCATGATAATGAATATC 36201
| ||| || ||| | || | | |||| |||||| | ||||||||||||||| ||
Sbjct 3696 A-ACATACAATTAAACATTGGAAAAAATGGTGAATAATCTAAATCATGATAATGAATTTC 3754
Query 36202 ACCATCTACATGCGC 36216
||| | | |||| ||
Sbjct 3755 ACCTTTTTCATGAGC 3769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524525945883120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |