Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_005135.1
Length=173591
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 95.1 1e-14
>seq2698
Length=11445
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/182 (72%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 65946 GATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAG 66005
|||| ||||||||||| || || || || ||||||| ||||| ||||| | |||||
Sbjct 5499 GATTTTGTGAAAGTTCTGGTAATAACATCTTGTTGTTGTTCAGGTGTTAAAGAGTTAAAT 5440
Query 66006 CGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATT 66065
| || ||||| || ||||| | || |||| || || |||||||| |||| | | |
Sbjct 5439 CTAACAGCATATCCTGAAACCCTAATTGTTAACTGCGGGTATTTTTCAGGATGTTCTACT 5380
Query 66066 GCATCTTCCAGGGT---ATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCA 66122
||||| || || ||||| |||||| ||||| || | ||| || |||||||||
Sbjct 5379 GCATCAAGAAGTGTTTCTTTTCG---AAGAACGTTTACATTTAAATGTTGTCCACCTTCA 5323
Query 66123 AC 66124
||
Sbjct 5322 AC 5321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555147656600040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |