Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq15839 102 3e-17 >seq15839 Length=1484 Score = 102 bits (112), Expect = 3e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 21974 CGAAAGCTCGCAGGGGAGGTCGCCTGGTATCGGTTCGAGGGCATTAAGCTGCGCCTGGCC 22033 || |||| |||||||| |||||||||| ||||| || | || ||||||||||| Sbjct 20 CGCAAGCGGGCAGGGGAAATCGCCTGGTACAAATTCGAAGGGCTGAAACTGCGCCTGGCG 79 Query 22034 GATAACACCTTCTACACCCCTGACTTCGCTGTGATGCTCACCGGCGGTGAGTTGGAACTG 22093 || ||||||||||||| ||| || ||| || ||||||| | |||||||| |||| Sbjct 80 GACAACACCTTCTACAGCCCGGATTTCTTCGTAATGCTCAGCAGCGGTGAGCTGGAGGCC 139 Query 22094 CACGAGGTGAAGGGGTACTGG 22114 ||||| || || ||| ||||| Sbjct 140 CACGAAGTCAAAGGGCACTGG 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208420301882884