Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_007023.1
Length=180500
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 113 5e-20
seq1262 95.1 1e-14
>seq2698
Length=11445
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 51908 CCGACTGTTAAAGTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACC 51967
|| ||||| | ||||||||||||||| || |||| || || || || || |||||
Sbjct 5309 CCTACTGTAAGAGTTGAAGGTGGACAACATTTAAATGTAAACGTTCTTCGAAAAGAAACA 5368
Query 51968 CTGGAAGATGCTGTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGT 52027
|| ||||| || |||||||||| || ||||| |||||||| || | ||||||||
Sbjct 5369 CTTCTTGATGCAGTAGAACATCCTGAAAAATACCCGCAGTTAACAATTAGGGTTTCAGGA 5428
Query 52028 TATGCAGTTCGCTTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACC 52087
||||| ||| | ||||| | | || || |||||||| | || ||||| |||||||
Sbjct 5429 TATGCTGTTAGATTTAACTCTTTAACACCTGAACAACAACAAGATGTTATTACCAGAACT 5488
Query 52088 TTTAC 52092
|| ||
Sbjct 5489 TTCAC 5493
>seq1262
Length=72559
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 96429 TCCTTAAAACGTTCTTTTCCAGTGCCATTGCATGAACTGCATTTTGGCGATCCGTGGTTA 96488
|| ||| | |||||||||||||| ||||| || ||||| |||||||| || | || |
Sbjct 18 TCTTTATATCGTTCTTTTCCAGTTCCATTACAAGAACTACATTTTGGTGAACGATGACTG 77
Query 96489 TCATACCGACCCGAACCGTTACATGCAAGACATTTCCGTAATTTCCAACCATACACGAAC 96548
||||||| || ||||||||||| |||| |||||| | ||||| | ||||| | ||
Sbjct 78 TCATACCTTCCAGAACCGTTACAAGCAACACATTTTCTCAATTTAAATCCATATTCAAAT 137
Query 96549 CGCATATAGTAATCGGTTCGTGCGGCTTTGCGTTCGTGGAAGTTCATACTTT 96600
| ||| | | |||| | | |||| | ||| || || ||||| ||||
Sbjct 138 TTAAAATAATGGTTCGTTCTTTCTTCTTTTCTTTCATGAAAATTCATGCTTT 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577247875898400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |