Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9465 89.7 5e-13 >seq9465 Length=7312 Score = 89.7 bits (98), Expect = 5e-13 Identities = 201/302 (67%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || || || || |||||||||| || || |||| | | ||||||||||| || Sbjct 6340 ACACACGAGGATTTATGGAATGCAGCACAAATACAGTTGAAAAGGGAGGGTAAAATGCAT 6399 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | | |||||||| ||||| ||||| || || || ||| | ||| ||| ||| | Sbjct 6400 GGTTTTATGCGCATGTATTGGGCTAAAAAAATACTAGAATGGTCGGAAAGTCCAGAGAAA 6459 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || | || | | || ||| | || || | || || ||||| | |||||||| Sbjct 6460 GCTTTGGAAATTGCCATCTATTTGAATGACAAGTATGCGCTGGACGGCAGTGATCCTAAT 6519 Query 71852 GGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACGT 71911 |||| ||| ||||| |||||| ||||| || | || ||| | | | ||| | Sbjct 6520 GGTTTTGTTGGTTGTATGTGGTCGATTTGTGGCATACATGATCAAGGATGGGGTGAAAGA 6579 Query 71912 CAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGTG 71971 ||| ||||||||||| || || ||||| | ||| || ||||||| || |||| Sbjct 6580 GCAGTTTTTGGTAAAATACGTTACATGAACTATGCTGGCTGTAAACGCAAATTTGATGTC 6639 Query 71972 AA 71973 || Sbjct 6640 AA 6641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478476625139280