Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4853 150 2e-31
seq2021 150 2e-31
seq26883 95.1 1e-14
>seq4853
Length=2014
Score = 150 bits (166), Expect = 2e-31
Identities = 725/1139 (64%), Gaps = 18/1139 (2%)
Strand=Plus/Plus
Query 145130 TTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTG 145189
|||||||||| |||||| || || | || || ||||| || | | || |||||
Sbjct 3 TTATTGCCCATGATTTGTGCAGTGGAGGCTGTAGGCATTGGTGCAATGAGCAAAGAATTA 62
Query 145190 CGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGC 145249
|||| ||| || || || | ||||| ||| |||||| |||||| ||| ||
Sbjct 63 CGCACGCCATGTTTAGCAATTTTCTCCTTCAGCTCCGCCCAATTCCATAGATCAGTAGGT 122
Query 145250 CTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAA 145309
| | |||||| || ||||| ||||| |||| |||| | || ||| | | |
Sbjct 123 GTTTTTTGCCACATATCATACTGTAAAATTCCCTTGCTGACAGGTGAGCCCGCATAAGTT 182
Query 145310 CTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAAT 145368
|| | |||| || | || | ||| || || || |||| || || |||||||
Sbjct 183 TCATAGG-GACCCAGCTTCTCAGCCAACTCACAGCTGGCTTCCAAGGCACCATAATAAAT 241
Query 145369 TGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAG 145428
|| || ||||| || ||| | ||||| || || || || || ||||
Sbjct 242 CGTTTCAAATATTTGTTGATTTAGCTTAAATGCTTCCTCACTTTCATATGGATAACGCAT 301
Query 145429 CAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTT 145488
|||| || ||||| |||| || |||| ||| | || ||||| ||||| ||| ||
Sbjct 302 GAGTATCAATGCATCTGCGAATCCTTGTACTCCAATACCTATGGGACGATGACGCATATT 361
Query 145489 GCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCG 145548
| | ||| | | || || ||| ||| || ||||| ||||| || ||
Sbjct 362 TGAACGCTTGGCCTCCGGCAGCGGGTAGTAATTGATGTCTATGATTTTGTTCAAATTACG 421
Query 145549 CACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGAC 145608
||| | || | || | | |||| ||| ||| | || || ||| |
Sbjct 422 TGTTACAATTTTAGCAACTTCTTTGAGTTTTTTAAAATCATA---AGTCTTGTCTGGGTT 478
Query 145609 CACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCT-CGGCGTCGC 145667
||| | |||||| || || || || ||||||||||| || | || | ||| | ||
Sbjct 479 GACAAACATATTGAGTGCAATTGAGGCTAAATTACAAACAGCAATTTCATCCGGTGCCG- 537
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||| ||| || || | ||| |||||||| || ||||| || || ||||| || ||||
Sbjct 538 AATATTCTACAATTTCAGTGCATAAATTGCTGCACTTGATAGTGCCTAGATTCTGTTGAT 597
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787
|||| || | || || || ||||| |||||||| || || |||||| ||||| || |
Sbjct 598 TACTCTTGCGATTACAAGCATCCTTATAGAGCATATATGGAGTGCCAGTTTCCACTTGAG 657
Query 145788 TCTCCACGAT--AAAACGGTGCAAGTCCTGCGCACGCAC-CTGCTGCTGGTAGCGGCCCT 145844
||| | || |||| |||| || || || ||| ||| | || || |
Sbjct 658 CCTCTATAATGGCAAAC--CACAAGGTTTGAGCTTTAACAGTGCGATTGGCA-CGACCTT 714
Query 145845 CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGG 145904
| || |||||| || || | ||| || | ||| | || || ||||
Sbjct 715 CACGCTCATATTTCTCATAAAGTTGCTCGAATTCTTCACCCCAAACTTCATGTAGTCCGG 774
Query 145905 GACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACA 145964
| ||||||| || ||||| || ||||| |||| | || | || || | ||| ||||
Sbjct 775 GGCACTTGTGTGGGCACATGAGTGACCAATCGCCATCTGCCTCCACACGTTTCATGAACA 834
Query 145965 AATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGT 146024
| || || | |||||| || || | || || || || | || || || | |
Sbjct 835 AGTCGGGTATCCACAGAGCATAGAATAAATCTCGTGCACGATACTCTTCCTTGCCAGTAT 894
Query 146025 TTCGCTTCAAAT-TAAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCG 146083
|| |||||||| || || | | | || |||| |||||| ||||| | ||||| ||||
Sbjct 895 TTTTCTTCAAATCCAAAAACTC-AAATATATCCGAGTGCCAGGGTTCCAAATAGATGGCG 953
Query 146084 AGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACG 146140
| ||| ||| ||||| ||| ||||| ||||||| || ||| ||| || || ||
Sbjct 954 AAGGCACCTGGACGTTTGCCGCCTCCCTGATCCACGTAGCGCGCCACGTTATTGAACACA 1013
Query 146141 CGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGG 146200
|||| ||| ||| | | || | | ||| ||||| || | ||||| |
Sbjct 1014 CGCAGCATAGGCACTAAACCATTAGAGGTGCCATTCGTGCCAGCAATGCCCGTGCCTTTG 1073
Query 146201 GAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCA 146259
| ||| | |||||| ||||||| ||| | ||||| || ||||||| || ||||||
Sbjct 1074 GCGCGTATGCAATGCACATTCAGGCCAATGCCGCCTGCGGACTTGGAGATCATGGCGCA 1132
>seq2021
Length=2943
Score = 150 bits (166), Expect = 2e-31
Identities = 917/1456 (63%), Gaps = 49/1456 (3%)
Strand=Plus/Minus
Query 144733 ATGGGCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGT 144792
|| ||| |||||||| ||||||||||| ||||| || || || | || | ||||
Sbjct 2129 ATTGGCAGCTGGCTTCGTGCGCAAATAATACATACCGGTCTTCAAGCCTGCTTTCCAACC 2070
Query 144793 GTAGTCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGA 144852
|||| ||||| || |||| | | || | ||||| |||||| | || | |||
Sbjct 2069 GTAGAAATGTATGGATGTCAGTTTACCATAATTCGGCTCAGCCACATGTATGTTAAACGA 2010
Query 144853 TTGGCTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTT 144912
||| |||||||| || ||||| || || || ||||| | ||| | |||| | |
Sbjct 2009 TTGACTTTGATCTATAAAAGCACCACGATCAGCTGCCATTTTAAT-AGACGTCTTAACAG 1951
Query 144913 CATT-TCCCAAGCGGTCTTGTACAA---ACGTTTAATGTGGTCCGGAATGCCGTCAATCG 144968
| | |||||| | ||||||||||| ||| | || | ||| || | |||||
Sbjct 1950 AAATCTCCCAAACTGTCTTGTACAAGTCACGCACA---TGCTGCGGTATACGCTCAATAT 1894
Query 144969 CCTGAATCGACCCCTTGTGCGCAAATA-TGGCGTTCCGCATTTCGGACGTGTACAGTTTT 145027
|| || || || || | | ||| | | || ||| || | || |
Sbjct 1893 TTTGTATGGATCCAC-GTTCAGATATAATATCATTTTTCATATCATCATCCCATAGATCA 1835
Query 145028 AACTTGATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACA 145087
| || | |||| || | || | ||||| || ||||| || || || | ||| |||
Sbjct 1834 AGCTCGGTCAAATCACGTAGCAAATGATGATTCACCACCTGGAATTCACCAGACAATACA 1775
Query 145088 CGACGCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGA 145147
||||| ||| | ||||| || | || |||||||| || |||||||||| ||||||
Sbjct 1774 CGACGTGTATAGATATTAGAAGTATAAGGCTCAAAAGATTCATTATTGCCCATGATTTGT 1715
Query 145148 GCGGTCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTG 145207
|| || | || || ||||| || | | || ||||| |||| ||| || ||
Sbjct 1714 GCAGTGGAGGCCGTAGGCATTGGTGCAATAAGCAAAGAATTACGCACGCCATGTTTAGCA 1655
Query 145208 ATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCG 145267
|| | ||||| ||| |||||| |||||| ||| || | | |||||| ||
Sbjct 1654 ATTTTCTCCTTCAGCTCCGCCCAATTCCATAGATCAGTAGGTGTTTTTTGCCACATATCA 1595
Query 145268 TACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGG------AACTG--------T 145313
||||| ||||| |||| |||| | || ||| | | | || || |
Sbjct 1594 TACTGTAAAATTCCCTTGCTGACAGGCGAGCCCGCATAAGTTTCATAANTGAGCCCGCAT 1535
Query 145314 AACT--------GCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAAT 145364
|| | | |||| || | || | ||| || || || |||| || || |||
Sbjct 1534 AAGTTTCATAGGGACCCAGCTTCTCAGCCAACTCACAGCTGGCTTCCAAGGCACCATAAT 1475
Query 145365 AAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGC 145424
|||| || || ||||| || ||| | ||||| || || || || || |
Sbjct 1474 AAATCGTTTCAAATATTTGTTGATTTAGCTTAAATGCTTCCTCACTTTCATATGGATAAC 1415
Query 145425 GCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCA 145484
||| |||| || ||||| |||| || |||| || | || ||||| ||||| ||
Sbjct 1414 GCATGAGTATTAATGCATCTGCGAATCCTTGTACGCCAATACCTATGGGACGATGACGCA 1355
Query 145485 TGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTATTCAAGT 145544
| || | | ||| | | || || ||| ||| || ||||| ||||| |
Sbjct 1354 TATTTGAACGCTTGGCCTCCGGCAGCGGGTAGTAATTGATGTCTATGATTTTGTTCAAAT 1295
Query 145545 TTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAA 145604
| || ||| | || | || | | |||| ||| ||| | || || |||
Sbjct 1294 TACGTGTTACAATTTTAGCAACTTCTTTGAGTTTTTTAAAATCATA---AGTCTTGTCTG 1238
Query 145605 CGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCT-CGGCG 145663
| ||| | |||||| || || || || ||||||||||| || | || | ||| |
Sbjct 1237 GGTTGACAAACATATTGAGTGCAATTGAGGCTAAATTACAAACAGCAATTTCATCCGGTG 1178
Query 145664 TCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGC 145723
|| |||| ||| || || | ||| |||||||| || ||||| || || ||||| ||
Sbjct 1177 CCG-AATATTCTACAATTTCAGTGCATAAATTGCTGCACTTGATAGTGCCTAGATTCTGT 1119
Query 145724 TGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACC 145783
|||||||| || | || || || ||||| |||||||| || || |||||| ||||||
Sbjct 1118 TGATTACTCTTGCGATTACAAGCATCCTTATAGAGCATATATGGAGTGCCAGTTTCCACC 1059
Query 145784 TGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGCACGCAC-CTGCTGCTGGTAGCGG 145840
|| | ||| | || |||| |||| || || || ||| ||| | ||
Sbjct 1058 TGAGCCTCTATAATGGCAAAC--CACAAGGTTTGAGCTTTAACAGTGCGATTGGCA-CGA 1002
Query 145841 CCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGG 145900
|| || || |||||| || || | ||| || | ||| | || ||
Sbjct 1001 CCTTCACGCTCATATTTCTCATAAAGTTGCTCGAATTCTTCACCCCAAACTTCATGTAGT 942
Query 145901 CCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATA 145960
||||| ||||||| || ||||| || ||||| |||| | || | || || | |||
Sbjct 941 CCGGGGCACTTGTGTGGGCACATGAGTGACCAATCGCCATCTGCCTCCACACGTTTCATG 882
Query 145961 AACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCC 146020
|| || || || | ||| || || || | || || || || | || || ||
Sbjct 881 AATAAGTCGGGTATCCATAGAGCATAAAATAAATCTCGTGCACGATACTCTTCCTTGCCA 822
Query 146021 ATGTTTCGCTTCAAAT-TAAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGAC 146079
| ||| |||||||| || || | | | || |||| |||||| ||||| | |||||
Sbjct 821 GTATTTTTCTTCAAATCCAAAAACTC-AAATATATCCGAGTGCCAGGGTTCTAAATAGAT 763
Query 146080 GGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAA 146136
||||| ||| ||| ||||| ||| ||||| ||||||| || ||| ||| || ||
Sbjct 762 GGCGAAGGCGCCTGGACGTTTGCCGCCTCCCTGATCCACGTAGCGCGCCACGTTATTGAA 703
Query 146137 GACGCGCACCATGGGC 146152
|| |||| ||| |||
Sbjct 702 CACACGCAGCATAGGC 687
>seq26883
Length=1584
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| ||| ||||| | || |||||||||||||||||||||||| |
Sbjct 684 CCACCACGAAGACGCAACACCAAATGCAATGTAGACTCCTTTTGAATGTTGTAATCGGCC 625
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | |||||||| ||| | || |||||||| ||||| || ||
Sbjct 624 AATGTGCGGCCATCCTCCAATTGCTTGCCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 565
Query 131128 AT 131129
||
Sbjct 564 AT 563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471829605932160
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