Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_008208.1 Length=161475 Score E Sequences producing significant alignments: (Bits) Value seq2789 105 7e-18 >seq2789 Length=15484 Score = 105 bits (116), Expect = 7e-18 Identities = 205/303 (68%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 37119 AATGTCAGGGTACATTCGCTTGGCTGAACATTCCAGAGCAAGGTGTTTAATTTCATAGTT 37178 ||| ||||| |||||||| | | ||||||||| || || || ||||| || ||||| || Sbjct 3131 AATATCAGGATACATTCGTTGTGTTGAACATTCAAGCGCCAGTTGTTTTATATCATAATT 3190 Query 37179 TGGATCTCCAGGATTTAAGTTTATACCGGCTTCCATGAACATAACGAGTTTTGGAAATAC 37238 ||||| | | | || ||| | || ||| ||| | ||| |||||||||||||| Sbjct 3191 AGGATCGCTATTAATTCTATTTGTCCCTTCTTTTATGGCAAAAACAAGTTTTGGAAATAC 3250 Query 37239 TGGTGTGATGCCATTCTTTCCAAGACCCTTGATTCGTACTTTCAAAATAGCTTTTTGAAT 37298 || || | ||| ||||| | || || |||| | | || || | ||||||||| Sbjct 3251 TGCCGTTTTTTTATTTTTTCCTAACCCATTTATTCTGTTTCTTAATATTGATTTTTGAAT 3310 Query 37299 TTCTTTTTCGAACCAGTTAGTTCCCATCCCAAATGTAATTGTCACGAACGGGGTTTGGCC 37358 | | |||| || |||| | ||||| || || || || |||||||| || Sbjct 3311 TAATCTTTCCTCTTTTGTAATTCCAAGTCCAAAACCAAAAGTAACAAATGGGGTTTGTCC 3370 Query 37359 ATTTGTGGTAAACATCGTGTTGACTTCATATTCGAAAGCTTGCATACCGTCATAGATTTC 37418 ||||| |||| || || || | ||||||||| || |||| | | | ||| | ||| Sbjct 3371 ATTTGCGGTATGCAAAGTATTAATTTCATATTCTAATCCTTGAAAAGCATCAAAACATTC 3430 Query 37419 TTT 37421 ||| Sbjct 3431 TTT 3433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516391504187400