Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_008208.1
Length=161475
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 105 7e-18
>seq2789
Length=15484
Score = 105 bits (116), Expect = 7e-18
Identities = 205/303 (68%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 37119 AATGTCAGGGTACATTCGCTTGGCTGAACATTCCAGAGCAAGGTGTTTAATTTCATAGTT 37178
||| ||||| |||||||| | | ||||||||| || || || ||||| || ||||| ||
Sbjct 3131 AATATCAGGATACATTCGTTGTGTTGAACATTCAAGCGCCAGTTGTTTTATATCATAATT 3190
Query 37179 TGGATCTCCAGGATTTAAGTTTATACCGGCTTCCATGAACATAACGAGTTTTGGAAATAC 37238
||||| | | | || ||| | || ||| ||| | ||| ||||||||||||||
Sbjct 3191 AGGATCGCTATTAATTCTATTTGTCCCTTCTTTTATGGCAAAAACAAGTTTTGGAAATAC 3250
Query 37239 TGGTGTGATGCCATTCTTTCCAAGACCCTTGATTCGTACTTTCAAAATAGCTTTTTGAAT 37298
|| || | ||| ||||| | || || |||| | | || || | |||||||||
Sbjct 3251 TGCCGTTTTTTTATTTTTTCCTAACCCATTTATTCTGTTTCTTAATATTGATTTTTGAAT 3310
Query 37299 TTCTTTTTCGAACCAGTTAGTTCCCATCCCAAATGTAATTGTCACGAACGGGGTTTGGCC 37358
| | |||| || |||| | ||||| || || || || |||||||| ||
Sbjct 3311 TAATCTTTCCTCTTTTGTAATTCCAAGTCCAAAACCAAAAGTAACAAATGGGGTTTGTCC 3370
Query 37359 ATTTGTGGTAAACATCGTGTTGACTTCATATTCGAAAGCTTGCATACCGTCATAGATTTC 37418
||||| |||| || || || | ||||||||| || |||| | | | ||| | |||
Sbjct 3371 ATTTGCGGTATGCAAAGTATTAATTTCATATTCTAATCCTTGAAAAGCATCAAAACATTC 3430
Query 37419 TTT 37421
|||
Sbjct 3431 TTT 3433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516391504187400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |