Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq9465 102 7e-17
seq26883 86.0 5e-12
seq14730 86.0 5e-12
>seq9465
Length=7312
Score = 102 bits (112), Expect = 7e-17
Identities = 178/254 (70%), Gaps = 10/254 (4%)
Strand=Plus/Minus
Query 50988 AAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTC 51047
||| || || |||||||| || |||||||| || | ||| | ||||||| | | ||
Sbjct 6633 AAATTTGCGTTTACAGCCAGCATAGTTCATGTAACGTATTTTACCAAAAACT----GCTC 6578
Query 51048 TTTGAACGG---CCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGT 51103
||| | | | || || || | || ||||| |||||||||||||| ||| || |
Sbjct 6577 TTTCACCCCATCCTTGATCATGTATGCCACAAATCGACCACATACAACCAACAAAACCAT 6518
Query 51104 TAGGATCGCGACCATCCA-CGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCC 51162
||||||| | || |||| ||| || | || || | | | |||||| |||| ||
Sbjct 6517 TAGGATCACTGCCGTCCAGCGCA-TACTTGTCATTCAAATAGATGGCAATTTCCAAAGCT 6459
Query 51163 ATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCG 51222
| |||| ||| || |||||| | ||||| || ||||| ||||||||||| ||||
Sbjct 6458 TTCTCTGGACTTTCCGACCATTCTAGTATTTTTTTAGCCCAATACATGCGCATAAAACCA 6399
Query 51223 TGCATCTTGCCCTC 51236
||||| || |||||
Sbjct 6398 TGCATTTTACCCTC 6385
>seq26883
Length=1584
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 25104 ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACT 25163
||||| || ||||||||||| | ||||| || ||||| ||||| || |||| |||||
Sbjct 563 ATTCCCCCAGACCAACAGCGTTTGATTTTCGCTGGCAAGCAATTGGAGGATGGCCGCACA 622
Query 25164 GTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTG 25208
||| ||||||||| |||||||| || || || | ||||| |||
Sbjct 623 TTGGCCGATTACAACATTCAAAAGGAGTCTACATTGCATTTGGTG 667
>seq14730
Length=2976
Score = 86.0 bits (94), Expect = 5e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 105550 AAAGGCTTGCACGGATTCCATGTACACGAATTCGGTGATACCAGCAATGGCTGTACATCA 105609
||||||||||| || |||||||| |||||||| ||||||| || ||||||||| || |||
Sbjct 2265 AAAGGCTTGCATGGCTTCCATGTGCACGAATTTGGTGATAACACCAATGGCTGCACCTCA 2206
Query 105610 GCAGGCGAGCATTTTAATCC 105629
|| ||| ||||| |||||
Sbjct 2205 GCTGGCCCTCATTTCAATCC 2186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433164024486935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |